Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CRYGFP-201ENST00000418459 633 ntBASIC19.79■□□□□ 0.76
RPRD1AQ96P16 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPRD1AQ96P16 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 FITM1-202ENST00000559294 800 ntBASIC19.78■□□□□ 0.76
RPRD1AQ96P16 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.78■□□□□ 0.76
RPRD1AQ96P16 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 AC087499.1-201ENST00000418141 1075 ntBASIC19.77■□□□□ 0.76
RPRD1AQ96P16 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RPRD1AQ96P16 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.77■□□□□ 0.75
RPRD1AQ96P16 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.77■□□□□ 0.75
RPRD1AQ96P16 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPRD1AQ96P16 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 AC007952.6-201ENST00000573168 2673 ntBASIC19.76■□□□□ 0.75
RPRD1AQ96P16 AC003957.1-201ENST00000625108 2673 ntBASIC19.76■□□□□ 0.75
RPRD1AQ96P16 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 MFAP1P1-201ENST00000442257 1255 ntBASIC19.76■□□□□ 0.75
RPRD1AQ96P16 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RPRD1AQ96P16 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 SLC25A24-204ENST00000569674 2357 ntBASIC19.75■□□□□ 0.75
RPRD1AQ96P16 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 AP005242.2-201ENST00000580065 1175 ntBASIC19.75■□□□□ 0.75
RPRD1AQ96P16 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.75■□□□□ 0.75
RPRD1AQ96P16 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms