Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 AC079602.3-201ENST00000623931 403 ntBASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 AC111152.3-201ENST00000569699 673 ntBASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 SDHAP1-207ENST00000440850 2000 ntBASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
COL27A1Q8IZC6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 FDX1P1-201ENST00000449115 551 ntBASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL27A1Q8IZC6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 AC092119.3-201ENST00000612618 583 ntBASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 AL732292.2-201ENST00000609649 430 ntBASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.09■□□□□ 0.49
COL27A1Q8IZC6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 AC034232.1-201ENST00000506026 1064 ntBASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 AL157888.1-201ENST00000631930 593 ntBASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL27A1Q8IZC6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL27A1Q8IZC6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL27A1Q8IZC6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.08■□□□□ 0.48
COL27A1Q8IZC6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL27A1Q8IZC6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL27A1Q8IZC6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.08■□□□□ 0.48
COL27A1Q8IZC6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.08■□□□□ 0.48
COL27A1Q8IZC6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.08■□□□□ 0.48
COL27A1Q8IZC6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL27A1Q8IZC6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.08■□□□□ 0.48
COL27A1Q8IZC6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms