Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 B3GAT3P1-201ENST00000471720 806 ntBASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 AC116562.2-201ENST00000507042 360 ntBASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 REXO1L10P-201ENST00000615707 1290 ntBASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 REXO1L12P-201ENST00000622156 912 ntBASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 FSCN1P1-201ENST00000568912 1481 ntBASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 AC004951.3-201ENST00000418645 1148 ntBASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 AC010331.1-201ENST00000611423 582 ntBASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 AC011298.2-201ENST00000617989 482 ntBASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCUBE3Q8IX30 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 MIR4785-201ENST00000585005 73 ntBASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SCUBE3Q8IX30 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 AC141586.3-201ENST00000562166 1838 ntBASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 KRT17P2-201ENST00000300992 1314 ntBASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCUBE3Q8IX30 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms