Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 TERF1P5-201ENST00000477545 1207 ntBASIC16.68■□□□□ 0.26
C11orf88Q6PI97 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 AC133041.1-202ENST00000642053 222 ntBASIC16.68■□□□□ 0.26
C11orf88Q6PI97 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 DPP3P2-201ENST00000416030 1696 ntBASIC16.68■□□□□ 0.26
C11orf88Q6PI97 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 AL050303.2-201ENST00000619798 666 ntBASIC16.67■□□□□ 0.26
C11orf88Q6PI97 AC008694.1-202ENST00000636953 945 ntBASIC16.67■□□□□ 0.26
C11orf88Q6PI97 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 CD99P1-205ENST00000527459 561 ntBASIC16.66■□□□□ 0.26
C11orf88Q6PI97 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 AC104581.1-202ENST00000635932 2618 ntBASIC16.66■□□□□ 0.26
C11orf88Q6PI97 AL390961.4-201ENST00000623958 2535 ntBASIC16.66■□□□□ 0.26
C11orf88Q6PI97 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 BX119927.1-201ENST00000636596 1552 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms