Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 TERF1P5-201ENST00000477545 1207 ntBASIC16.68■□□□□ 0.26
C11orf88Q6PI97 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 AC133041.1-202ENST00000642053 222 ntBASIC16.68■□□□□ 0.26
C11orf88Q6PI97 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 DPP3P2-201ENST00000416030 1696 ntBASIC16.68■□□□□ 0.26
C11orf88Q6PI97 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 AL050303.2-201ENST00000619798 666 ntBASIC16.67■□□□□ 0.26
C11orf88Q6PI97 AC008694.1-202ENST00000636953 945 ntBASIC16.67■□□□□ 0.26
C11orf88Q6PI97 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf88Q6PI97 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 CD99P1-205ENST00000527459 561 ntBASIC16.66■□□□□ 0.26
C11orf88Q6PI97 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 AC104581.1-202ENST00000635932 2618 ntBASIC16.66■□□□□ 0.26
C11orf88Q6PI97 AL390961.4-201ENST00000623958 2535 ntBASIC16.66■□□□□ 0.26
C11orf88Q6PI97 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C11orf88Q6PI97 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C11orf88Q6PI97 BX119927.1-201ENST00000636596 1552 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms