Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 FDX1P1-201ENST00000449115 551 ntBASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNKSR3Q6P9H4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 AL845331.1-201ENST00000424978 1190 ntBASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 AP002383.4-201ENST00000442518 975 ntBASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNKSR3Q6P9H4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNKSR3Q6P9H4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNKSR3Q6P9H4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNKSR3Q6P9H4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNKSR3Q6P9H4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNKSR3Q6P9H4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
CNKSR3Q6P9H4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNKSR3Q6P9H4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
CNKSR3Q6P9H4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNKSR3Q6P9H4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.64■□□□□ 0.9
CNKSR3Q6P9H4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.64■□□□□ 0.89
CNKSR3Q6P9H4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CNKSR3Q6P9H4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNKSR3Q6P9H4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNKSR3Q6P9H4 FAAHP1-202ENST00000446499 1238 ntBASIC20.64■□□□□ 0.89
CNKSR3Q6P9H4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.64■□□□□ 0.89
CNKSR3Q6P9H4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNKSR3Q6P9H4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.64■□□□□ 0.89
CNKSR3Q6P9H4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.64■□□□□ 0.89
CNKSR3Q6P9H4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CNKSR3Q6P9H4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.64■□□□□ 0.89
CNKSR3Q6P9H4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNKSR3Q6P9H4 AC036111.1-201ENST00000533973 1582 ntBASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 AL512408.1-201ENST00000569378 2000 ntBASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 KRT8P26-201ENST00000534154 1276 ntBASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
CNKSR3Q6P9H4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR3Q6P9H4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR3Q6P9H4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CNKSR3Q6P9H4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR3Q6P9H4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR3Q6P9H4 ZNF815P-204ENST00000434898 1737 ntBASIC20.62■□□□□ 0.89
CNKSR3Q6P9H4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.62■□□□□ 0.89
CNKSR3Q6P9H4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNKSR3Q6P9H4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms