Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT9P35527 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.98■□□□□ 0.95
KRT9P35527 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
KRT9P35527 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KRT9P35527 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.97■□□□□ 0.95
KRT9P35527 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.97■□□□□ 0.95
KRT9P35527 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT9P35527 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT9P35527 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT9P35527 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KRT9P35527 SDHAP1-207ENST00000440850 2000 ntBASIC20.97■□□□□ 0.95
KRT9P35527 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT9P35527 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT9P35527 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT9P35527 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT9P35527 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KRT9P35527 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.97■□□□□ 0.95
KRT9P35527 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KRT9P35527 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.97■□□□□ 0.95
KRT9P35527 AC120498.8-201ENST00000614275 531 ntBASIC20.97■□□□□ 0.95
KRT9P35527 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
KRT9P35527 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
KRT9P35527 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KRT9P35527 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT9P35527 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.97■□□□□ 0.95
KRT9P35527 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT9P35527 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.96■□□□□ 0.95
KRT9P35527 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
KRT9P35527 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.96■□□□□ 0.95
KRT9P35527 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
KRT9P35527 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
KRT9P35527 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 AC104417.2-201ENST00000562989 1793 ntBASIC20.96■□□□□ 0.95
KRT9P35527 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
KRT9P35527 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.96■□□□□ 0.95
KRT9P35527 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
KRT9P35527 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 FP475955.4-201ENST00000623131 1990 ntBASIC20.96■□□□□ 0.95
KRT9P35527 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT9P35527 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT9P35527 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT9P35527 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT9P35527 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT9P35527 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
KRT9P35527 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
KRT9P35527 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT9P35527 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.95■□□□□ 0.94
KRT9P35527 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
KRT9P35527 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.95■□□□□ 0.94
KRT9P35527 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
KRT9P35527 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.95■□□□□ 0.94
KRT9P35527 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.95■□□□□ 0.94
KRT9P35527 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
KRT9P35527 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KRT9P35527 AL031598.1-201ENST00000561511 1773 ntBASIC20.95■□□□□ 0.94
KRT9P35527 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT9P35527 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT9P35527 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT9P35527 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
KRT9P35527 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT9P35527 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms