Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.84■□□□□ 0.61
VARSP26640 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.84■□□□□ 0.61
VARSP26640 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.84■□□□□ 0.61
VARSP26640 AP001412.1-201ENST00000608405 714 ntBASIC18.84■□□□□ 0.61
VARSP26640 REXO1L12P-201ENST00000622156 912 ntBASIC18.84■□□□□ 0.61
VARSP26640 AC079416.2-201ENST00000625035 1193 ntBASIC18.84■□□□□ 0.61
VARSP26640 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.84■□□□□ 0.61
VARSP26640 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VARSP26640 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VARSP26640 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
VARSP26640 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.84■□□□□ 0.61
VARSP26640 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.84■□□□□ 0.61
VARSP26640 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.84■□□□□ 0.61
VARSP26640 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VARSP26640 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VARSP26640 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.83■□□□□ 0.61
VARSP26640 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
VARSP26640 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
VARSP26640 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.83■□□□□ 0.61
VARSP26640 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VARSP26640 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VARSP26640 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VARSP26640 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
VARSP26640 KRT17P2-201ENST00000300992 1314 ntBASIC18.83■□□□□ 0.61
VARSP26640 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VARSP26640 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.83■□□□□ 0.61
VARSP26640 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VARSP26640 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VARSP26640 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VARSP26640 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VARSP26640 FAM210CP-201ENST00000445714 574 ntBASIC18.83■□□□□ 0.6
VARSP26640 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.83■□□□□ 0.6
VARSP26640 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.83■□□□□ 0.6
VARSP26640 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VARSP26640 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
VARSP26640 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VARSP26640 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
VARSP26640 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VARSP26640 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VARSP26640 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VARSP26640 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VARSP26640 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VARSP26640 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VARSP26640 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VARSP26640 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.82■□□□□ 0.6
VARSP26640 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARSP26640 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARSP26640 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARSP26640 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.82■□□□□ 0.6
VARSP26640 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VARSP26640 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARSP26640 YBX1P10-201ENST00000444752 975 ntBASIC18.82■□□□□ 0.6
VARSP26640 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.82■□□□□ 0.6
VARSP26640 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.82■□□□□ 0.6
VARSP26640 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VARSP26640 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.82■□□□□ 0.6
VARSP26640 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.82■□□□□ 0.6
VARSP26640 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.82■□□□□ 0.6
VARSP26640 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VARSP26640 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
VARSP26640 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.82■□□□□ 0.6
VARSP26640 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.82■□□□□ 0.6
VARSP26640 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARSP26640 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARSP26640 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.82■□□□□ 0.6
VARSP26640 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
VARSP26640 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.81■□□□□ 0.6
VARSP26640 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.81■□□□□ 0.6
VARSP26640 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 AC005332.8-201ENST00000622750 2735 ntBASIC18.81■□□□□ 0.6
VARSP26640 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.81■□□□□ 0.6
VARSP26640 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
VARSP26640 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.81■□□□□ 0.6
VARSP26640 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
VARSP26640 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VARSP26640 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
VARSP26640 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.81■□□□□ 0.6
VARSP26640 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VARSP26640 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VARSP26640 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
VARSP26640 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.81■□□□□ 0.6
VARSP26640 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms