Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYN1P17600 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYN1P17600 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYN1P17600 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SYN1P17600 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.91■□□□□ 0.94
SYN1P17600 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYN1P17600 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYN1P17600 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SYN1P17600 HMGN1P19-201ENST00000436976 333 ntBASIC20.91■□□□□ 0.94
SYN1P17600 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYN1P17600 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.91■□□□□ 0.94
SYN1P17600 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.91■□□□□ 0.94
SYN1P17600 LINC00167-201ENST00000530583 1419 ntBASIC20.91■□□□□ 0.94
SYN1P17600 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.91■□□□□ 0.94
SYN1P17600 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.91■□□□□ 0.94
SYN1P17600 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.91■□□□□ 0.94
SYN1P17600 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SYN1P17600 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SYN1P17600 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN1P17600 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN1P17600 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.9■□□□□ 0.94
SYN1P17600 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
SYN1P17600 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.9■□□□□ 0.94
SYN1P17600 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN1P17600 AKR1C7P-201ENST00000305623 895 ntBASIC20.9■□□□□ 0.94
SYN1P17600 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.9■□□□□ 0.94
SYN1P17600 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SYN1P17600 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.9■□□□□ 0.94
SYN1P17600 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.9■□□□□ 0.94
SYN1P17600 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SYN1P17600 AP001005.1-201ENST00000571755 1248 ntBASIC20.9■□□□□ 0.94
SYN1P17600 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.9■□□□□ 0.94
SYN1P17600 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN1P17600 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN1P17600 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN1P17600 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SYN1P17600 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.89■□□□□ 0.94
SYN1P17600 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SYN1P17600 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYN1P17600 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYN1P17600 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYN1P17600 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.89■□□□□ 0.93
SYN1P17600 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.89■□□□□ 0.93
SYN1P17600 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYN1P17600 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.89■□□□□ 0.93
SYN1P17600 AC099336.1-202ENST00000602961 463 ntBASIC20.89■□□□□ 0.93
SYN1P17600 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.89■□□□□ 0.93
SYN1P17600 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.89■□□□□ 0.93
SYN1P17600 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.89■□□□□ 0.93
SYN1P17600 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.89■□□□□ 0.93
SYN1P17600 SMG8-203ENST00000578922 2178 ntBASIC20.89■□□□□ 0.93
SYN1P17600 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYN1P17600 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN1P17600 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.88■□□□□ 0.93
SYN1P17600 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN1P17600 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN1P17600 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYN1P17600 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN1P17600 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN1P17600 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
SYN1P17600 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN1P17600 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SYN1P17600 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.88■□□□□ 0.93
SYN1P17600 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.88■□□□□ 0.93
SYN1P17600 HLA-F-220ENST00000434407 884 ntBASIC20.88■□□□□ 0.93
SYN1P17600 KRT18P58-201ENST00000527480 1120 ntBASIC20.88■□□□□ 0.93
SYN1P17600 AL157888.1-201ENST00000631930 593 ntBASIC20.88■□□□□ 0.93
SYN1P17600 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.88■□□□□ 0.93
SYN1P17600 AC092720.2-201ENST00000602388 1665 ntBASIC20.88■□□□□ 0.93
SYN1P17600 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN1P17600 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYN1P17600 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYN1P17600 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN1P17600 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYN1P17600 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYN1P17600 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
SYN1P17600 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
SYN1P17600 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYN1P17600 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYN1P17600 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYN1P17600 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYN1P17600 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SYN1P17600 RNA5SP419-201ENST00000515908 135 ntBASIC20.87■□□□□ 0.93
SYN1P17600 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SYN1P17600 AL136038.4-201ENST00000603606 1261 ntBASIC20.87■□□□□ 0.93
SYN1P17600 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYN1P17600 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYN1P17600 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.87■□□□□ 0.93
SYN1P17600 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SYN1P17600 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYN1P17600 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYN1P17600 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.87■□□□□ 0.93
SYN1P17600 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.87■□□□□ 0.93
SYN1P17600 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.86■□□□□ 0.93
SYN1P17600 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYN1P17600 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SYN1P17600 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYN1P17600 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SYN1P17600 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.86■□□□□ 0.93
SYN1P17600 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms