Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT3P12035 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT3P12035 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT3P12035 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT3P12035 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT3P12035 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT3P12035 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
KRT3P12035 HTR7P1-201ENST00000538670 1336 ntBASIC20.21■□□□□ 0.83
KRT3P12035 AL161938.1-201ENST00000569833 2180 ntBASIC20.21■□□□□ 0.83
KRT3P12035 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
KRT3P12035 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT3P12035 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
KRT3P12035 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT3P12035 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT3P12035 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
KRT3P12035 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT3P12035 PRORSD1P-201ENST00000295112 541 ntBASIC20.2■□□□□ 0.82
KRT3P12035 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
KRT3P12035 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT3P12035 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT3P12035 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KRT3P12035 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT3P12035 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT3P12035 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT3P12035 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
KRT3P12035 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT3P12035 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT3P12035 FAM197Y4-202ENST00000622692 608 ntBASIC20.2■□□□□ 0.82
KRT3P12035 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.2■□□□□ 0.82
KRT3P12035 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
KRT3P12035 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
KRT3P12035 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT3P12035 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT3P12035 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT3P12035 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
KRT3P12035 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT3P12035 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT3P12035 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT3P12035 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT3P12035 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
KRT3P12035 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KRT3P12035 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.19■□□□□ 0.82
KRT3P12035 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT3P12035 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.19■□□□□ 0.82
KRT3P12035 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.19■□□□□ 0.82
KRT3P12035 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
KRT3P12035 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.19■□□□□ 0.82
KRT3P12035 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.19■□□□□ 0.82
KRT3P12035 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KRT3P12035 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT3P12035 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.19■□□□□ 0.82
KRT3P12035 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT3P12035 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT3P12035 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT3P12035 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT3P12035 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
KRT3P12035 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.18■□□□□ 0.82
KRT3P12035 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.18■□□□□ 0.82
KRT3P12035 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT3P12035 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT3P12035 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT3P12035 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
KRT3P12035 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT3P12035 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
KRT3P12035 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.18■□□□□ 0.82
KRT3P12035 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT3P12035 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT3P12035 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT3P12035 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.18■□□□□ 0.82
KRT3P12035 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT3P12035 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT3P12035 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT3P12035 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT3P12035 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT3P12035 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT3P12035 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT3P12035 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT3P12035 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT3P12035 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT3P12035 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT3P12035 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT3P12035 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT3P12035 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT3P12035 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
KRT3P12035 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms