Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GFRA3O60609 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.67■□□□□ 0.58
GFRA3O60609 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.67■□□□□ 0.58
GFRA3O60609 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.67■□□□□ 0.58
GFRA3O60609 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.67■□□□□ 0.58
GFRA3O60609 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.67■□□□□ 0.58
GFRA3O60609 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.67■□□□□ 0.58
GFRA3O60609 AC116407.3-201ENST00000623905 1129 ntBASIC18.67■□□□□ 0.58
GFRA3O60609 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.67■□□□□ 0.58
GFRA3O60609 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.67■□□□□ 0.58
GFRA3O60609 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.67■□□□□ 0.58
GFRA3O60609 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA3O60609 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.66■□□□□ 0.58
GFRA3O60609 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA3O60609 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.66■□□□□ 0.58
GFRA3O60609 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GFRA3O60609 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA3O60609 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA3O60609 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
GFRA3O60609 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
GFRA3O60609 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA3O60609 AL591424.1-201ENST00000442569 1213 ntBASIC18.66■□□□□ 0.58
GFRA3O60609 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.66■□□□□ 0.58
GFRA3O60609 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA3O60609 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.66■□□□□ 0.58
GFRA3O60609 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.66■□□□□ 0.58
GFRA3O60609 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA3O60609 KRT8P11-201ENST00000409686 1436 ntBASIC18.66■□□□□ 0.58
GFRA3O60609 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA3O60609 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA3O60609 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.65■□□□□ 0.58
GFRA3O60609 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.65■□□□□ 0.58
GFRA3O60609 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA3O60609 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA3O60609 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GFRA3O60609 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GFRA3O60609 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GFRA3O60609 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA3O60609 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.65■□□□□ 0.58
GFRA3O60609 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.65■□□□□ 0.58
GFRA3O60609 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.65■□□□□ 0.58
GFRA3O60609 VENTXP7-201ENST00000475503 772 ntBASIC18.65■□□□□ 0.58
GFRA3O60609 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.65■□□□□ 0.58
GFRA3O60609 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA3O60609 AC145285.3-201ENST00000564603 959 ntBASIC18.65■□□□□ 0.58
GFRA3O60609 AC011467.4-201ENST00000594891 528 ntBASIC18.65■□□□□ 0.58
GFRA3O60609 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA3O60609 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.65■□□□□ 0.58
GFRA3O60609 AL355877.3-201ENST00000622820 899 ntBASIC18.65■□□□□ 0.58
GFRA3O60609 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA3O60609 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.65■□□□□ 0.58
GFRA3O60609 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA3O60609 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.65■□□□□ 0.58
GFRA3O60609 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.65■□□□□ 0.58
GFRA3O60609 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.65■□□□□ 0.58
GFRA3O60609 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA3O60609 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA3O60609 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
GFRA3O60609 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
GFRA3O60609 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GFRA3O60609 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
GFRA3O60609 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
GFRA3O60609 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GFRA3O60609 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GFRA3O60609 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GFRA3O60609 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.64■□□□□ 0.57
GFRA3O60609 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.64■□□□□ 0.57
GFRA3O60609 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
GFRA3O60609 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GFRA3O60609 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.64■□□□□ 0.57
GFRA3O60609 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.64■□□□□ 0.57
GFRA3O60609 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.64■□□□□ 0.57
GFRA3O60609 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
GFRA3O60609 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.64■□□□□ 0.57
GFRA3O60609 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.64■□□□□ 0.57
GFRA3O60609 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.64■□□□□ 0.57
GFRA3O60609 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
GFRA3O60609 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFRA3O60609 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.63■□□□□ 0.57
GFRA3O60609 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFRA3O60609 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFRA3O60609 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFRA3O60609 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFRA3O60609 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GFRA3O60609 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.63■□□□□ 0.57
GFRA3O60609 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
GFRA3O60609 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GFRA3O60609 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.63■□□□□ 0.57
GFRA3O60609 AC040169.1-201ENST00000565382 521 ntBASIC18.63■□□□□ 0.57
GFRA3O60609 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
GFRA3O60609 AC005332.3-201ENST00000589904 676 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms