Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCNT1O60563 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNT1O60563 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CCNT1O60563 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.82■■□□□ 1.08
CCNT1O60563 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.82■■□□□ 1.08
CCNT1O60563 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.82■■□□□ 1.08
CCNT1O60563 AC011506.1-201ENST00000474329 610 ntBASIC21.82■■□□□ 1.08
CCNT1O60563 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.82■■□□□ 1.08
CCNT1O60563 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.82■■□□□ 1.08
CCNT1O60563 MIR6786-201ENST00000616843 113 ntBASIC21.82■■□□□ 1.08
CCNT1O60563 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCNT1O60563 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.82■■□□□ 1.08
CCNT1O60563 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNT1O60563 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNT1O60563 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.82■■□□□ 1.08
CCNT1O60563 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
CCNT1O60563 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.82■■□□□ 1.08
CCNT1O60563 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
CCNT1O60563 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNT1O60563 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CCNT1O60563 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNT1O60563 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNT1O60563 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNT1O60563 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNT1O60563 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNT1O60563 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCNT1O60563 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNT1O60563 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNT1O60563 MESTP1-201ENST00000404287 994 ntBASIC21.81■■□□□ 1.08
CCNT1O60563 AC004951.3-201ENST00000418645 1148 ntBASIC21.81■■□□□ 1.08
CCNT1O60563 B3GAT3P1-201ENST00000471720 806 ntBASIC21.81■■□□□ 1.08
CCNT1O60563 AC091390.4-202ENST00000476426 537 ntBASIC21.81■■□□□ 1.08
CCNT1O60563 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNT1O60563 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.81■■□□□ 1.08
CCNT1O60563 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CCNT1O60563 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.81■■□□□ 1.08
CCNT1O60563 AC011298.2-201ENST00000617989 482 ntBASIC21.81■■□□□ 1.08
CCNT1O60563 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNT1O60563 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNT1O60563 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.81■■□□□ 1.08
CCNT1O60563 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNT1O60563 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNT1O60563 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNT1O60563 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNT1O60563 AC141586.3-201ENST00000562166 1838 ntBASIC21.8■■□□□ 1.08
CCNT1O60563 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.8■■□□□ 1.08
CCNT1O60563 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.8■■□□□ 1.08
CCNT1O60563 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CCNT1O60563 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNT1O60563 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCNT1O60563 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNT1O60563 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNT1O60563 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNT1O60563 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNT1O60563 FSCN1P1-201ENST00000568912 1481 ntBASIC21.8■■□□□ 1.08
CCNT1O60563 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNT1O60563 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNT1O60563 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNT1O60563 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.8■■□□□ 1.08
CCNT1O60563 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.8■■□□□ 1.08
CCNT1O60563 AC008040.2-201ENST00000461049 708 ntBASIC21.8■■□□□ 1.08
CCNT1O60563 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.8■■□□□ 1.08
CCNT1O60563 MIR4497-201ENST00000583208 89 ntBASIC21.8■■□□□ 1.08
CCNT1O60563 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.8■■□□□ 1.08
CCNT1O60563 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.8■■□□□ 1.08
CCNT1O60563 REXO1L10P-201ENST00000615707 1290 ntBASIC21.8■■□□□ 1.08
CCNT1O60563 REXO1L12P-201ENST00000622156 912 ntBASIC21.8■■□□□ 1.08
CCNT1O60563 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.8■■□□□ 1.08
CCNT1O60563 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNT1O60563 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.8■■□□□ 1.08
CCNT1O60563 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNT1O60563 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.8■■□□□ 1.08
CCNT1O60563 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCNT1O60563 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNT1O60563 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCNT1O60563 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.79■■□□□ 1.08
CCNT1O60563 AL596275.1-201ENST00000423464 877 ntBASIC21.79■■□□□ 1.08
CCNT1O60563 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCNT1O60563 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.79■■□□□ 1.08
CCNT1O60563 AC116562.2-201ENST00000507042 360 ntBASIC21.79■■□□□ 1.08
CCNT1O60563 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.79■■□□□ 1.08
CCNT1O60563 AP003071.4-201ENST00000562276 1284 ntBASIC21.79■■□□□ 1.08
CCNT1O60563 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.79■■□□□ 1.08
CCNT1O60563 MIR4785-201ENST00000585005 73 ntBASIC21.79■■□□□ 1.08
CCNT1O60563 AC130371.2-201ENST00000619443 611 ntBASIC21.79■■□□□ 1.08
CCNT1O60563 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNT1O60563 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNT1O60563 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCNT1O60563 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNT1O60563 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.79■■□□□ 1.08
CCNT1O60563 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNT1O60563 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.79■■□□□ 1.08
CCNT1O60563 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNT1O60563 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNT1O60563 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNT1O60563 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNT1O60563 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNT1O60563 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNT1O60563 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCNT1O60563 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms