Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.66■□□□□ 0.1
SSSCA1O60232 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SSSCA1O60232 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SSSCA1O60232 MCRIP2P1-201ENST00000394346 511 ntBASIC15.66■□□□□ 0.1
SSSCA1O60232 KRT19P1-201ENST00000405746 1186 ntBASIC15.66■□□□□ 0.1
SSSCA1O60232 TERF1P5-201ENST00000477545 1207 ntBASIC15.66■□□□□ 0.1
SSSCA1O60232 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.66■□□□□ 0.1
SSSCA1O60232 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.66■□□□□ 0.1
SSSCA1O60232 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.66■□□□□ 0.1
SSSCA1O60232 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.66■□□□□ 0.1
SSSCA1O60232 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SSSCA1O60232 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.66■□□□□ 0.1
SSSCA1O60232 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.66■□□□□ 0.1
SSSCA1O60232 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSSCA1O60232 AL512353.2-201ENST00000448759 1962 ntBASIC15.66■□□□□ 0.1
SSSCA1O60232 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.66■□□□□ 0.1
SSSCA1O60232 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SSSCA1O60232 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.65■□□□□ 0.1
SSSCA1O60232 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SSSCA1O60232 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.65■□□□□ 0.1
SSSCA1O60232 NOC2LP2-201ENST00000407594 1944 ntBASIC15.65■□□□□ 0.1
SSSCA1O60232 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SSSCA1O60232 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.65■□□□□ 0.1
SSSCA1O60232 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.65■□□□□ 0.1
SSSCA1O60232 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 AC123595.1-201ENST00000440769 1046 ntBASIC15.65■□□□□ 0.1
SSSCA1O60232 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.65■□□□□ 0.1
SSSCA1O60232 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.65■□□□□ 0.1
SSSCA1O60232 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SSSCA1O60232 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 ZNF815P-204ENST00000434898 1737 ntBASIC15.65■□□□□ 0.1
SSSCA1O60232 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SSSCA1O60232 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.65■□□□□ 0.1
SSSCA1O60232 AC018553.1-201ENST00000616682 1458 ntBASIC15.65■□□□□ 0.1
SSSCA1O60232 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.65■□□□□ 0.1
SSSCA1O60232 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSSCA1O60232 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SSSCA1O60232 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.64■□□□□ 0.09
SSSCA1O60232 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SSSCA1O60232 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.64■□□□□ 0.09
SSSCA1O60232 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.64■□□□□ 0.09
SSSCA1O60232 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 KRT18P14-201ENST00000534205 1250 ntBASIC15.64■□□□□ 0.09
SSSCA1O60232 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.64■□□□□ 0.09
SSSCA1O60232 AC010536.3-201ENST00000620306 533 ntBASIC15.64■□□□□ 0.09
SSSCA1O60232 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.64■□□□□ 0.09
SSSCA1O60232 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSSCA1O60232 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.64■□□□□ 0.09
SSSCA1O60232 IRX1P1-201ENST00000438849 1838 ntBASIC15.64■□□□□ 0.09
SSSCA1O60232 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms