Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SBNO1A3KN83 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
SBNO1A3KN83 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SBNO1A3KN83 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SBNO1A3KN83 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SBNO1A3KN83 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC26.04■■□□□ 1.76
SBNO1A3KN83 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SBNO1A3KN83 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SBNO1A3KN83 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC26.04■■□□□ 1.76
SBNO1A3KN83 AC023511.2-201ENST00000618803 211 ntBASIC26.04■■□□□ 1.76
SBNO1A3KN83 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC26.04■■□□□ 1.76
SBNO1A3KN83 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
SBNO1A3KN83 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SBNO1A3KN83 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SBNO1A3KN83 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SBNO1A3KN83 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
SBNO1A3KN83 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SBNO1A3KN83 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SBNO1A3KN83 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SBNO1A3KN83 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SBNO1A3KN83 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC26.03■■□□□ 1.76
SBNO1A3KN83 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SBNO1A3KN83 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
SBNO1A3KN83 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SBNO1A3KN83 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
SBNO1A3KN83 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC26.02■■□□□ 1.76
SBNO1A3KN83 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC26.02■■□□□ 1.76
SBNO1A3KN83 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SBNO1A3KN83 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SBNO1A3KN83 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC26.02■■□□□ 1.76
SBNO1A3KN83 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SBNO1A3KN83 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
SBNO1A3KN83 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SBNO1A3KN83 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
SBNO1A3KN83 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SBNO1A3KN83 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC26.02■■□□□ 1.76
SBNO1A3KN83 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC26.02■■□□□ 1.76
SBNO1A3KN83 KRT8P26-201ENST00000534154 1276 ntBASIC26.02■■□□□ 1.76
SBNO1A3KN83 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC26.02■■□□□ 1.76
SBNO1A3KN83 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
SBNO1A3KN83 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SBNO1A3KN83 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SBNO1A3KN83 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC26.02■■□□□ 1.76
SBNO1A3KN83 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SBNO1A3KN83 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC26.02■■□□□ 1.76
SBNO1A3KN83 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC26.02■■□□□ 1.76
SBNO1A3KN83 GABARAPL3-202ENST00000624044 1851 ntBASIC26.02■■□□□ 1.76
SBNO1A3KN83 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC26.01■■□□□ 1.76
SBNO1A3KN83 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC26.01■■□□□ 1.75
SBNO1A3KN83 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC26.01■■□□□ 1.75
SBNO1A3KN83 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
SBNO1A3KN83 AC009078.2-202ENST00000463353 338 ntBASIC26.01■■□□□ 1.75
SBNO1A3KN83 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC26.01■■□□□ 1.75
SBNO1A3KN83 AC104692.2-201ENST00000603054 253 ntBASIC26.01■■□□□ 1.75
SBNO1A3KN83 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC26.01■■□□□ 1.75
SBNO1A3KN83 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC26.01■■□□□ 1.75
SBNO1A3KN83 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC26.01■■□□□ 1.75
SBNO1A3KN83 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC26.01■■□□□ 1.75
SBNO1A3KN83 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SBNO1A3KN83 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
SBNO1A3KN83 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC26■■□□□ 1.75
SBNO1A3KN83 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC26■■□□□ 1.75
SBNO1A3KN83 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SBNO1A3KN83 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SBNO1A3KN83 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC26■■□□□ 1.75
SBNO1A3KN83 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC26■■□□□ 1.75
SBNO1A3KN83 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC26■■□□□ 1.75
SBNO1A3KN83 TSPY19P-201ENST00000418461 509 ntBASIC26■■□□□ 1.75
SBNO1A3KN83 TSPY18P-201ENST00000441642 509 ntBASIC26■■□□□ 1.75
SBNO1A3KN83 AC004263.2-201ENST00000617183 678 ntBASIC26■■□□□ 1.75
SBNO1A3KN83 AL031008.1-201ENST00000619963 541 ntBASIC26■■□□□ 1.75
SBNO1A3KN83 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
SBNO1A3KN83 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SBNO1A3KN83 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC26■■□□□ 1.75
SBNO1A3KN83 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
SBNO1A3KN83 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC26■■□□□ 1.75
SBNO1A3KN83 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SBNO1A3KN83 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SBNO1A3KN83 AL162741.1-201ENST00000565563 1558 ntBASIC26■■□□□ 1.75
SBNO1A3KN83 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SBNO1A3KN83 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SBNO1A3KN83 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC25.99■■□□□ 1.75
SBNO1A3KN83 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC25.99■■□□□ 1.75
SBNO1A3KN83 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SBNO1A3KN83 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SBNO1A3KN83 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC25.99■■□□□ 1.75
SBNO1A3KN83 CHCHD2P8-201ENST00000429873 447 ntBASIC25.99■■□□□ 1.75
SBNO1A3KN83 MPI-205ENST00000562606 1052 ntTSL 3 BASIC25.99■■□□□ 1.75
SBNO1A3KN83 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC25.99■■□□□ 1.75
SBNO1A3KN83 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC25.99■■□□□ 1.75
SBNO1A3KN83 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC25.99■■□□□ 1.75
SBNO1A3KN83 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC25.99■■□□□ 1.75
SBNO1A3KN83 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC25.99■■□□□ 1.75
SBNO1A3KN83 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SBNO1A3KN83 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SBNO1A3KN83 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SBNO1A3KN83 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
SBNO1A3KN83 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SBNO1A3KN83 KRT18P1-202ENST00000452408 1331 ntBASIC25.98■■□□□ 1.75
SBNO1A3KN83 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms