Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 RNA5SP43-201ENST00000516559 110 ntBASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 RNU7-51P-201ENST00000516560 62 ntBASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 DEFB108D-201ENST00000527787 222 ntBASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 AC128657.1-201ENST00000549459 145 ntBASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 AC005730.3-201ENST00000583067 366 ntBASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 AL049634.3-201ENST00000604968 457 ntBASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.8□□□□□ -1.64
TNPO3Q9Y5L0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 PABPC1P6-201ENST00000445594 1829 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 Y_RNA.38-201ENST00000362617 102 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 RNY3P3-201ENST00000363816 102 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 RNU6-606P-201ENST00000384721 111 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 MIR558-201ENST00000384920 94 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 MIR1-2-201ENST00000384961 85 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 MT-TL1-201ENST00000386347 75 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 RNU6-1158P-201ENST00000391167 107 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 RNU6-876P-201ENST00000391295 104 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 HSPD1P16-201ENST00000402302 394 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AL391361.1-201ENST00000405580 489 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 RNU2-9P-201ENST00000410194 145 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 RNU4-65P-201ENST00000410473 140 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 RN7SKP125-201ENST00000410481 302 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 RNU6-712P-201ENST00000410558 100 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 RPS7P15-201ENST00000415804 584 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 MED13P1-201ENST00000428342 171 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AL389925.1-201ENST00000432257 728 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 USP12PX-201ENST00000432383 1057 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 BNIP3P2-201ENST00000441221 577 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AL121871.1-201ENST00000443413 436 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC007967.1-201ENST00000455422 1159 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 HSPD1P15-201ENST00000505573 1122 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC114797.1-201ENST00000514003 728 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 RNU6-507P-201ENST00000516045 100 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC092490.3-201ENST00000545370 572 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC034105.3-201ENST00000565294 442 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 OR4K8P-201ENST00000578842 1048 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 SNORA74C-1-201ENST00000580726 201 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC090616.5-202ENST00000582111 297 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 HMGB2P1-201ENST00000591146 634 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 MIR6768-201ENST00000610734 72 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 YWHAEP7-203ENST00000622054 312 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC015871.5-202ENST00000623252 701 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC006065.5-201ENST00000623427 349 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 FRG1KP-201ENST00000623592 341 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AC009033.1-201ENST00000624279 431 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 AP005264.7-201ENST00000625003 745 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 MIR3662-201ENST00000637030 95 ntBASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.79□□□□□ -1.64
TNPO3Q9Y5L0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
TNPO3Q9Y5L0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TNPO3Q9Y5L0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNPO3Q9Y5L0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNPO3Q9Y5L0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.78□□□□□ -1.64
TNPO3Q9Y5L0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
TNPO3Q9Y5L0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNPO3Q9Y5L0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNPO3Q9Y5L0 RNU6-1155P-201ENST00000363554 107 ntBASIC4.78□□□□□ -1.64
TNPO3Q9Y5L0 AC068050.1-201ENST00000394891 380 ntBASIC4.78□□□□□ -1.64
TNPO3Q9Y5L0 RNA5SP118-201ENST00000410385 109 ntBASIC4.78□□□□□ -1.64
TNPO3Q9Y5L0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNPO3Q9Y5L0 SNRPFP1-201ENST00000414761 252 ntBASIC4.78□□□□□ -1.64
TNPO3Q9Y5L0 RPS12P23-201ENST00000419579 400 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms