Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 BDP1P-201ENST00000582658 1990 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 RNA5SP50-201ENST00000363731 107 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 SNORD74.4-201ENST00000364129 80 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 RNU5A-2P-201ENST00000384337 116 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 CYCSP45-201ENST00000402289 315 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 RPL23AP48-201ENST00000406913 488 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AL603766.1-201ENST00000407763 664 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 RNA5SP239-201ENST00000410218 129 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 DBIP2-201ENST00000419076 262 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 ATP5JP1-201ENST00000431631 322 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 UBE2D3P4-201ENST00000441973 436 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC133473.1-201ENST00000455173 299 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC099563.1-201ENST00000456086 418 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 RN7SKP234-201ENST00000517173 224 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC104986.1-201ENST00000517978 436 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC023161.2-201ENST00000551218 780 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 CYCSP2-201ENST00000558168 301 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC007566.2-201ENST00000603642 413 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AP000811.1-201ENST00000603803 651 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 Z94722.1-201ENST00000604328 474 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC121247.2-201ENST00000604776 136 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC122133.1-201ENST00000613964 233 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC091905.1-201ENST00000624400 311 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AL079343.1-201ENST00000572358 1771 ntBASIC3.8□□□□□ -1.8
YIPF1Q9Y548 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
YIPF1Q9Y548 AP002907.1-201ENST00000606361 1430 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 MTND5P1-201ENST00000445440 1375 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 RNU6-553P-201ENST00000364047 96 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 RNU4-40P-201ENST00000364351 143 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 SNORA9-201ENST00000384215 133 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AC090960.1-201ENST00000421072 306 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AL035410.1-201ENST00000427409 427 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 OR51AB1P-201ENST00000429046 620 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 MTND1P20-201ENST00000430341 950 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 NDUFB1P1-201ENST00000435191 180 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 MTCO3P16-201ENST00000454456 754 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AC008155.2-201ENST00000464337 397 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 RPS15AP17-201ENST00000470598 390 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 SYPL1P1-201ENST00000473622 768 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 RPS3AP43-201ENST00000479743 781 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AL358832.1-201ENST00000497800 389 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 TMEM251P1-201ENST00000503717 318 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AC111000.2-201ENST00000507775 550 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AC091515.1-201ENST00000548110 679 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.79□□□□□ -1.8
YIPF1Q9Y548 MIR4637-201ENST00000582405 84 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 MAGOH2P-202ENST00000584384 429 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AC010620.1-201ENST00000601088 1102 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 BNIP3P11-201ENST00000603878 563 ntBASIC3.79□□□□□ -1.8
YIPF1Q9Y548 AC025588.3-201ENST00000604182 274 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms