Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 EI24P4-201ENST00000423683 1078 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 SKA2P1-201ENST00000425592 390 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 FABP5P14-201ENST00000437273 393 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AF228730.2-201ENST00000438784 848 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 RPS29P10-201ENST00000439197 166 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AC087879.1-201ENST00000474343 374 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 RN7SL283P-201ENST00000489055 303 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AC017037.2-201ENST00000513850 890 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 RNU6-347P-201ENST00000516658 105 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AC090615.1-201ENST00000577519 154 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AC005014.2-201ENST00000607795 599 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AL031666.3-201ENST00000609320 1006 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AC118658.2-201ENST00000618697 459 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 RNU6-156P-201ENST00000621869 107 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 MTCYBP10-201ENST00000424905 650 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 OR2AS1P-201ENST00000427827 319 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AL035666.1-201ENST00000446195 348 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 RPL7P52-201ENST00000449200 742 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AL162395.1-201ENST00000457882 422 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AP001992.1-205ENST00000462248 379 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 RPL7P43-201ENST00000478876 753 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 TRBVA-201ENST00000498804 316 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 RNA5SP503-201ENST00000517047 117 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 RNA5SP454-201ENST00000517231 127 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AC024224.1-201ENST00000538284 609 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 MIR4675-201ENST00000577898 77 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AC011477.5-201ENST00000586571 259 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AP001486.3-201ENST00000615334 372 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AL049794.2-201ENST00000616301 365 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 U4.1-201ENST00000620349 87 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 AC098657.3-201ENST00000620434 263 ntBASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.4□□□□□ -1.54
AP4E1Q9UPM8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
AP4E1Q9UPM8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
AP4E1Q9UPM8 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
AP4E1Q9UPM8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
AP4E1Q9UPM8 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
AP4E1Q9UPM8 AL592148.3-201ENST00000608771 2646 ntBASIC5.4□□□□□ -1.55
AP4E1Q9UPM8 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
AP4E1Q9UPM8 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 Y_RNA.5-201ENST00000362334 102 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 UBE2V1P2-201ENST00000397758 440 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AL139397.2-201ENST00000404529 772 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 RPS4XP9-201ENST00000405151 780 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms