Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 AC073522.1-201ENST00000483312 377 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 SETP14-201ENST00000497538 873 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 RNU6-1225P-201ENST00000516336 65 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 AC090136.1-201ENST00000520009 240 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 AC022655.2-201ENST00000577280 318 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 POLR3GP2-201ENST00000588366 668 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 MIR8069-1-201ENST00000616627 86 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 AL603758.1-201ENST00000618654 241 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 MIR8069-2-201ENST00000621412 86 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 AC105074.1-201ENST00000623380 3095 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 RNU6-1309P-201ENST00000363305 108 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 Y_RNA.307-201ENST00000365022 117 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 SNORA19-201ENST00000384737 128 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 RNU2-39P-201ENST00000410604 198 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 AC104306.1-201ENST00000449702 371 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 AC022364.2-201ENST00000457963 554 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 UBE2DNL-203ENST00000474922 222 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 ACTG1P13-201ENST00000486987 1043 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 RN7SKP57-201ENST00000517248 293 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 AK6P1-201ENST00000540219 478 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 FAM106CP-201ENST00000582212 507 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 NUTF2P8-201ENST00000604593 363 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 AC115621.1-201ENST00000604653 858 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 AC134503.1-201ENST00000633048 54 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 PRO1804-201ENST00000623780 2050 ntBASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC6.35□□□□□ -1.39
COL17A1Q9UMD9 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 RNU6-666P-201ENST00000363499 107 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AL080315.1-201ENST00000406055 466 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 MIR548P-201ENST00000408336 84 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 RNU6-575P-201ENST00000411326 105 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 PTP4A1P1-201ENST00000420539 515 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AL358176.2-201ENST00000425769 204 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AC007742.1-201ENST00000425789 329 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 ELOCP26-201ENST00000436067 329 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 RPS24P6-201ENST00000452670 400 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AL445433.1-201ENST00000457507 257 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 RPS4XP18-201ENST00000495480 763 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AC008269.2-201ENST00000561915 1105 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AC234782.5-201ENST00000617723 324 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 SCARNA15.3-201ENST00000626315 122 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 SCARNA4.1-201ENST00000628597 123 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 ERCC6-202ENST00000374127 1782 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 AC109315.1-201ENST00000584143 1347 ntBASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL17A1Q9UMD9 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms