Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 MTCO2P32-201ENST00000514865 403 ntBASIC3.32□□□□□ -1.88
CDH9Q9ULB4 RNU6-334P-201ENST00000517072 102 ntBASIC3.32□□□□□ -1.88
CDH9Q9ULB4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.32□□□□□ -1.88
CDH9Q9ULB4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 PSMA2P1-201ENST00000526365 646 ntBASIC3.32□□□□□ -1.88
CDH9Q9ULB4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 AC093510.2-201ENST00000562820 896 ntBASIC3.32□□□□□ -1.88
CDH9Q9ULB4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 SNORD39.3-201ENST00000584451 71 ntBASIC3.32□□□□□ -1.88
CDH9Q9ULB4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 AC006539.2-201ENST00000601729 572 ntBASIC3.32□□□□□ -1.88
CDH9Q9ULB4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 AC002487.1-201ENST00000604565 994 ntBASIC3.32□□□□□ -1.88
CDH9Q9ULB4 AP005229.2-201ENST00000609980 697 ntBASIC3.32□□□□□ -1.88
CDH9Q9ULB4 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 AC073968.1-201ENST00000618594 637 ntBASIC3.32□□□□□ -1.88
CDH9Q9ULB4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 BX649567.1-201ENST00000642071 1134 ntBASIC3.32□□□□□ -1.88
CDH9Q9ULB4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CDH9Q9ULB4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 AC004925.1-201ENST00000624256 2706 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 SRP72P2-201ENST00000344851 1979 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 AL353743.1-202ENST00000431724 1695 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 MTND4P34-201ENST00000572715 1371 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 MIR422A-201ENST00000362286 90 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 RNU6-115P-201ENST00000364310 107 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 SNORA48.5-201ENST00000391143 135 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 TMSB4XP8-201ENST00000402089 135 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 AL023807.1-201ENST00000407932 359 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 RNA5SP107-201ENST00000411358 122 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 TMSB4XP6-201ENST00000415187 135 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 TMSB4XP1-201ENST00000424567 135 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 AL035410.1-201ENST00000427409 427 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 AC016696.1-201ENST00000446949 318 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 NDUFA5P7-201ENST00000452914 242 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 TRBV26-201ENST00000456572 344 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 RPS27AP1-201ENST00000475545 471 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 AC012181.1-201ENST00000479895 423 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 AC113192.3-201ENST00000529152 742 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 AL163153.1-201ENST00000554223 283 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 AC005000.2-201ENST00000605468 310 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 AL591516.1-201ENST00000611326 274 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH9Q9ULB4 AF117829.1-206ENST00000621883 3802 ntBASIC3.31□□□□□ -1.88
CDH9Q9ULB4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH9Q9ULB4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH9Q9ULB4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH9Q9ULB4 RNU6-1249P-201ENST00000363237 111 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 RNU6-805P-201ENST00000365643 106 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 SNORA48.2-201ENST00000390926 124 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 RPL22P22-201ENST00000395439 379 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 RPL7P25-201ENST00000404151 721 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 AL139098.1-201ENST00000407291 389 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 SFR1P2-201ENST00000421841 730 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 RPS6P14-201ENST00000425165 719 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 HMGB1P15-201ENST00000453854 435 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 RPS29P2-201ENST00000479278 136 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 AC108078.3-201ENST00000502633 489 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 MTND4LP22-201ENST00000508209 276 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 TXNP6-201ENST00000510190 310 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 AC008885.1-201ENST00000514930 301 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 RNA5SP341-201ENST00000516261 117 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 AC104027.1-201ENST00000521887 300 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH9Q9ULB4 AC006518.2-201ENST00000542513 940 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.3□□□□□ -1.88
CDH9Q9ULB4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH9Q9ULB4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH9Q9ULB4 AL162274.2-201ENST00000614406 332 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CDH9Q9ULB4 AC018816.2-201ENST00000621460 353 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 MTND2P41-201ENST00000637599 773 ntBASIC3.3□□□□□ -1.88
CDH9Q9ULB4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH9Q9ULB4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH9Q9ULB4 ZNF833P-201ENST00000424938 1494 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms