Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC004696.1-201ENST00000614345 607 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AL450472.3-201ENST00000615578 367 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC007792.1-201ENST00000623023 402 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC074029.4-201ENST00000624796 1859 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC140134.1-201ENST00000511830 3544 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AC087516.1-201ENST00000561236 2428 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 HSPA8P4-201ENST00000511877 1920 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 SNORD1C-201ENST00000363315 78 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 Y_RNA.455-201ENST00000384230 98 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 RPL21P67-201ENST00000402896 478 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 OR6E1P-201ENST00000414424 923 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AC016769.2-201ENST00000414815 475 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 PPP1R11P2-201ENST00000423543 382 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 CBX3P6-201ENST00000430257 527 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 RPS20P1-201ENST00000434853 354 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 ACA64.4-201ENST00000459070 127 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 RN7SL269P-201ENST00000467795 305 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AC103987.1-201ENST00000473394 348 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 PGAM1P13-201ENST00000507497 754 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 OR8R1P-201ENST00000543943 764 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AC022404.1-201ENST00000555320 273 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AC010547.6-201ENST00000571789 193 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AC005899.2-201ENST00000584353 90 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 FAM27E4-201ENST00000605259 342 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AC007619.2-201ENST00000605743 379 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 uc_338.26-201ENST00000612659 160 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 U73479.1-201ENST00000618062 168 ntBASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FOXD3Q9UJU5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 SAMMSON-213ENST00000641336 1521 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 Y_RNA.428-201ENST00000384078 102 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 Y_RNA.480-201ENST00000384364 102 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 RNU2-43P-201ENST00000410306 190 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 AC099677.3-201ENST00000427081 395 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 AC096775.1-201ENST00000437724 448 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 AL590399.6-201ENST00000446396 307 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 RPL29P29-201ENST00000448725 423 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms