Protein–RNA interactions for Protein: Q9UGU5

HMGXB4, HMG domain-containing protein 4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4Q9UGU5 AC009501.3-201ENST00000605001 1352 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC092593.1-201ENST00000515413 1815 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 SNORA80A-201ENST00000363922 136 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 SNORA51.4-201ENST00000364993 124 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 RNU6-851P-201ENST00000384565 107 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 RNA5SP492-201ENST00000411330 114 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 YPEL5P1-201ENST00000419731 367 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AL390023.1-201ENST00000428836 262 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 TRIM60P13-201ENST00000432350 1283 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC010301.1-201ENST00000473936 355 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC126121.1-201ENST00000482313 553 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC105914.1-201ENST00000511798 226 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 RN7SKP96-201ENST00000516948 297 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 DNAJC8P1-201ENST00000554535 372 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC107954.1-201ENST00000565906 727 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC090751.1-201ENST00000566966 267 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC009220.3-201ENST00000604318 586 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AL009028.1-201ENST00000604895 802 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 RBM12B-AS1-201ENST00000623283 653 ntBASIC3□□□□□ -1.93
HMGXB4Q9UGU5 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
HMGXB4Q9UGU5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 RNU6-525P-201ENST00000363685 104 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 RNU6-1027P-201ENST00000383998 107 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 RPL21P75-201ENST00000396599 483 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 RPL21P28-201ENST00000401418 483 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 MTND4P13-201ENST00000402078 1023 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AL592114.1-201ENST00000403842 483 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 BMS1P22-201ENST00000414726 313 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AL645937.1-202ENST00000421799 937 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 COTL1P1-201ENST00000422309 375 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AL590623.1-201ENST00000427864 105 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AL831737.1-201ENST00000441288 271 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 XKRY2-201ENST00000442362 1093 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 snoU13.3-201ENST00000459441 104 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 RPL21P39-201ENST00000463605 483 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AC011979.1-201ENST00000472300 483 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 RPL21P93-201ENST00000480465 489 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AC233702.1-201ENST00000482905 502 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AC087190.1-201ENST00000484462 480 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AC093591.1-201ENST00000491435 481 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 RPL21P16-201ENST00000495531 483 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AC107016.2-201ENST00000547968 190 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 LARP7P3-201ENST00000579888 337 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 RPL23AP88-201ENST00000605759 454 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AC242628.1-201ENST00000606810 391 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 AC110792.4-201ENST00000609843 298 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 MTND5P19-201ENST00000424872 1794 ntBASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HMGXB4Q9UGU5 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HMGXB4Q9UGU5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HMGXB4Q9UGU5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HMGXB4Q9UGU5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.98□□□□□ -1.93
HMGXB4Q9UGU5 RNU1-112P-201ENST00000364401 164 ntBASIC2.98□□□□□ -1.93
HMGXB4Q9UGU5 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.98□□□□□ -1.93
HMGXB4Q9UGU5 MIR181B1-201ENST00000385240 110 ntBASIC2.98□□□□□ -1.93
HMGXB4Q9UGU5 MTATP6P31-201ENST00000406985 692 ntBASIC2.98□□□□□ -1.93
HMGXB4Q9UGU5 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.98□□□□□ -1.93
HMGXB4Q9UGU5 HSFY1P1-201ENST00000423928 1178 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms