Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MTCYBP20-201ENST00000524239 1129 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 MTND4LP18-201ENST00000526864 291 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 AC090615.1-201ENST00000577519 154 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 AC079089.3-201ENST00000603094 673 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 AL031666.3-201ENST00000609320 1006 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 AC006133.1-201ENST00000617106 264 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 AL359893.1-201ENST00000447628 1580 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL20A1Q9P218 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL20A1Q9P218 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL20A1Q9P218 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.55□□□□□ -1.68
COL20A1Q9P218 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.55□□□□□ -1.68
COL20A1Q9P218 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL20A1Q9P218 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL20A1Q9P218 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL20A1Q9P218 MTCO1P24-201ENST00000515438 1558 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL20A1Q9P218 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL20A1Q9P218 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 AL359837.1-201ENST00000381357 287 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 RNU6-769P-201ENST00000384407 104 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 MIR153-1-201ENST00000384914 90 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 RNU2-15P-201ENST00000410692 191 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 PDSS1P1-201ENST00000422953 1114 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL20A1Q9P218 MTND1P28-201ENST00000435623 950 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 PDSS1P2-201ENST00000449397 678 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 AP001992.1-205ENST00000462248 379 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 RPL21P129-201ENST00000491732 478 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 ARL2BPP4-201ENST00000506854 471 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 MTCO3P44-201ENST00000510977 541 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC091516.1-201ENST00000549191 703 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 MIR4429-201ENST00000580105 73 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC005771.1-201ENST00000585581 349 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 TPMTP1-201ENST00000592307 737 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC009509.4-201ENST00000619202 509 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC112200.1-201ENST00000625015 234 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 Z82217.1-201ENST00000625157 8149 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.54□□□□□ -1.68
COL20A1Q9P218 AC090229.1-201ENST00000590983 1609 ntBASIC4.54□□□□□ -1.68
COL20A1Q9P218 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL20A1Q9P218 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL20A1Q9P218 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL20A1Q9P218 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 RNU6-744P-201ENST00000365557 107 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 RNU6-356P-201ENST00000384140 107 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 RNU6-1316P-201ENST00000384242 108 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 RNU6-339P-201ENST00000384310 107 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 MIR554-201ENST00000384874 96 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 RN7SKP247-201ENST00000411094 308 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms