Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC010198.2-201ENST00000550612 259 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 YWHAZP1-201ENST00000556286 722 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC106782.4-201ENST00000568264 210 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 MIR5708-201ENST00000579723 85 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 KLKP1-201ENST00000595979 403 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 BNIP3P27-201ENST00000599991 412 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC073387.2-201ENST00000604797 784 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC090116.1-201ENST00000615679 446 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC026634.1-201ENST00000634369 198 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC013437.2-201ENST00000639587 677 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 MFSD8-245ENST00000641743 948 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC092326.2-201ENST00000624772 1561 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 RNA5SP42-201ENST00000364278 115 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 Y_RNA.493-201ENST00000384422 102 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AL133384.1-201ENST00000412744 351 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AL512649.1-201ENST00000428997 581 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AC092393.1-201ENST00000439625 742 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 TXNP1-201ENST00000441872 371 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 HMGB3P8-201ENST00000449709 577 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 TRBV26-201ENST00000456572 344 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 RN7SL594P-201ENST00000470590 287 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AC023598.1-201ENST00000472521 361 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 SYPL1P1-201ENST00000473622 768 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 RPL21P13-201ENST00000488305 481 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 BOLA3P3-201ENST00000505182 232 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 PCBP2P3-201ENST00000509726 843 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 PHBP14-201ENST00000512887 367 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 SNORA19.3-201ENST00000516165 130 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 UBE2NP1-201ENST00000545592 458 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AL606834.2-201ENST00000602954 668 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AL021368.2-201ENST00000606125 5352 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.55□□□□□ -1.84
HPS4Q9NQG7 AC103988.1-201ENST00000566382 2177 ntBASIC3.55□□□□□ -1.84
HPS4Q9NQG7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 RNU6-492P-201ENST00000363035 104 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 RNU6-263P-201ENST00000363811 107 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 RNVU1-3-201ENST00000364313 161 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 RNU6-283P-201ENST00000364788 107 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 RNU6-339P-201ENST00000384310 107 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 U3.19-201ENST00000390893 196 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 RNA5SP56-201ENST00000410277 118 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AC096664.2-201ENST00000411843 406 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 OR4K6P-201ENST00000416478 897 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AC092634.6-201ENST00000418558 192 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AC013410.2-201ENST00000422627 201 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AL035410.1-201ENST00000427409 427 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AL590103.1-201ENST00000434488 307 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 Z75741.1-201ENST00000446793 314 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 snoU13.3-201ENST00000459441 104 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AC084357.1-201ENST00000473404 255 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 VPS26AP1-201ENST00000483197 979 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 RPL23AP55-201ENST00000498163 452 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 OR5H5P-201ENST00000503164 928 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms