Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CYCSP2-201ENST00000558168 301 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 MTCYBP28-201ENST00000566728 1132 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AC022916.3-201ENST00000592961 742 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AC020914.6-201ENST00000594327 272 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 VN1R85P-201ENST00000601587 426 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AC079684.1-201ENST00000621405 437 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AC026951.1-201ENST00000559530 2459 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 CEP170P1-201ENST00000502249 4587 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 Y_RNA.77-201ENST00000362962 107 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AL121972.1-201ENST00000402023 252 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 MIR1193-201ENST00000408109 78 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 NUP35P2-201ENST00000416748 943 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AL953862.1-201ENST00000423016 168 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 MED14P1-201ENST00000430517 648 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AL117351.1-201ENST00000438864 766 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 RPL23AP16-201ENST00000441715 421 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 RPS26P56-201ENST00000444468 240 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 EEF1E1P1-201ENST00000446998 430 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 MTND1P29-201ENST00000448112 647 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 ANP32BP2-201ENST00000454525 545 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AP000873.1-201ENST00000463987 400 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 RPL9P32-201ENST00000464118 620 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 RN7SL323P-201ENST00000494712 295 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC090071.1-201ENST00000507713 644 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 IGKV2D-23-201ENST00000518179 286 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC007115.1-201ENST00000546853 234 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC008127.2-201ENST00000549925 1075 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AL121576.1-201ENST00000556055 276 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC009101.1-201ENST00000568135 242 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 LARP7P2-201ENST00000575306 125 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 RN7SL703P-201ENST00000578485 302 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC119751.7-201ENST00000600494 245 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AL596327.1-201ENST00000603629 213 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC110741.2-201ENST00000605278 268 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 RN7SKP299-201ENST00000606679 301 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AC024941.1-201ENST00000612250 334 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AL158063.1-201ENST00000615349 536 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 AL079343.1-201ENST00000572358 1771 ntBASIC3.89□□□□□ -1.79
PCDH9Q9HC56 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDH9Q9HC56 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 Y_RNA.201-201ENST00000364052 96 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 RNA5SP167-201ENST00000365461 116 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 RNU6-1226P-201ENST00000384317 107 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 SNORA57.1-201ENST00000391227 145 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 RPL7P2-201ENST00000427639 268 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms