Protein–RNA interactions for Protein: Q9GZZ0

HOXD1, Homeobox protein Hox-D1, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1Q9GZZ0 AC004908.3-201ENST00000610248 625 ntBASIC3.44□□□□□ -1.86
HOXD1Q9GZZ0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXD1Q9GZZ0 AL136981.2-201ENST00000617319 734 ntBASIC3.44□□□□□ -1.86
HOXD1Q9GZZ0 AC103706.2-201ENST00000638080 240 ntBASIC3.44□□□□□ -1.86
HOXD1Q9GZZ0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXD1Q9GZZ0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXD1Q9GZZ0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
HOXD1Q9GZZ0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 ZNF37BP-203ENST00000452306 1352 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 RPL32P23-201ENST00000397237 405 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 EIF5P1-201ENST00000400019 1231 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 RNU2-37P-201ENST00000410695 177 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 PIGPP2-201ENST00000411569 458 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 USP9YP33-201ENST00000412220 421 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AL133384.1-201ENST00000412744 351 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 USP9YP26-201ENST00000421008 661 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AL022400.1-201ENST00000423946 935 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AC234781.2-201ENST00000426370 994 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AL035410.1-201ENST00000427409 427 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 USP9YP35-201ENST00000435696 412 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AL606662.1-201ENST00000445763 553 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 TRBV26-201ENST00000456572 344 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 LINC00888-204ENST00000487386 421 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 RNA5SP208-201ENST00000516156 78 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 SCARNA14-201ENST00000516903 136 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 HSPE1P5-201ENST00000561489 272 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AC005412.1-201ENST00000580812 1049 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AC025588.3-201ENST00000604182 274 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AC067959.1-201ENST00000604334 379 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AC112220.3-201ENST00000605502 502 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 FAM91A3P-201ENST00000456826 2544 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 AC130650.2-201ENST00000618736 2403 ntBASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD1Q9GZZ0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 MTND4P34-201ENST00000572715 1371 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AC026951.1-201ENST00000559530 2459 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 MIR124-3-201ENST00000384866 87 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 RN7SKP156-201ENST00000410308 342 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 RNA5SP293-201ENST00000410527 113 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 RNU4-72P-201ENST00000410754 173 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 HMGB3P20-201ENST00000417997 600 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 SETP5-201ENST00000437270 562 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 MTCYBP3-201ENST00000445588 1137 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 MTCYBP11-201ENST00000447254 1109 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AC010655.1-201ENST00000449336 292 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 RPS27P29-201ENST00000463110 252 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AL133162.1-201ENST00000463228 453 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AC010401.1-201ENST00000463867 348 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AP002884.2-201ENST00000471647 395 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 RN7SL442P-201ENST00000473804 320 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 BET1P1-201ENST00000482276 359 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AC108078.3-201ENST00000502633 489 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 RNF138P1-201ENST00000502765 546 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 AC026412.2-201ENST00000512270 1075 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 HIGD1AP3-201ENST00000515857 278 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 IGHV3-76-201ENST00000522465 295 ntBASIC3.42□□□□□ -1.86
HOXD1Q9GZZ0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms