Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 RPL32P3-201ENST00000359025 275 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 RNU6-1085P-201ENST00000363576 107 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 RNVU1-6-201ENST00000364688 164 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 RNU6-114P-201ENST00000384704 105 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 RNA5SP113-201ENST00000410486 84 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC138393.2-201ENST00000414742 246 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AL139413.1-201ENST00000421309 217 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 MTCO1P20-201ENST00000425366 358 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 ZNF863P-201ENST00000426746 417 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC133104.1-201ENST00000429100 218 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 MTCYBP45-201ENST00000435243 565 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC104850.1-201ENST00000435940 476 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 EIF4A1P11-201ENST00000451239 222 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 RPS5P7-201ENST00000456664 608 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC010469.1-201ENST00000463864 576 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 RPS20P21-201ENST00000466859 343 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC006967.1-201ENST00000467608 589 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 RPL35P6-201ENST00000490024 372 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC023194.1-201ENST00000493084 308 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC069439.1-201ENST00000494739 167 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 PPBPP1-201ENST00000510807 373 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC105914.1-201ENST00000511798 226 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC093853.1-201ENST00000515689 483 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 Vault.3-201ENST00000516676 95 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC109635.3-201ENST00000529536 185 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC069240.1-201ENST00000548774 375 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AL512360.1-201ENST00000555346 234 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC025678.1-201ENST00000567861 338 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC090615.1-201ENST00000577519 154 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AP005119.2-201ENST00000579735 1105 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 MIR3118-1-201ENST00000581787 76 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 HMGB2P1-201ENST00000591146 634 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC012507.3-201ENST00000603556 477 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AL031320.1-201ENST00000604177 357 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC007363.1-201ENST00000604736 620 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 LARP7P1-201ENST00000605576 316 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC008966.2-201ENST00000606157 453 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 MIR98-201ENST00000606724 119 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AP002360.3-201ENST00000607673 710 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 MIR1321-201ENST00000637766 79 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 SAMMSON-226ENST00000642089 1582 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 SNORA72.1-201ENST00000363485 129 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 RNU6-1090P-201ENST00000364065 94 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 SNORD82-201ENST00000365530 70 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 RN7SKP100-201ENST00000411258 284 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AL591848.1-201ENST00000413092 322 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 USP9YP27-201ENST00000418455 438 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 RPS15AP40-201ENST00000419621 391 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 OR4F13P-201ENST00000428478 931 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AL121601.2-201ENST00000438019 707 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AL136380.1-201ENST00000447970 162 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 MTND5P20-201ENST00000448677 143 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms