Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MIR4319-201ENST00000577285 85 ntBASIC3.55□□□□□ -1.84
RPAP1Q9BWH6 AC132825.7-201ENST00000638744 335 ntBASIC3.55□□□□□ -1.84
RPAP1Q9BWH6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RPAP1Q9BWH6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPAP1Q9BWH6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
RPAP1Q9BWH6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPAP1Q9BWH6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
RPAP1Q9BWH6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPAP1Q9BWH6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
RPAP1Q9BWH6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AL445183.3-201ENST00000414168 502 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AL512661.1-201ENST00000434586 1253 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 YWHAZP8-201ENST00000436935 731 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 RPL23AP33-201ENST00000442301 452 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 RPL32P28-201ENST00000443577 397 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 MTND1P33-201ENST00000446251 917 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AC233982.1-201ENST00000451247 436 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 HMGB3P30-201ENST00000457863 606 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 RNA5SP76-201ENST00000516277 87 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AC087272.1-201ENST00000523624 533 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 OR5G4P-201ENST00000525251 760 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AL157394.1-201ENST00000562983 1224 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AC079148.1-201ENST00000565944 819 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AC095057.3-201ENST00000567102 1157 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 MIR4506-201ENST00000584693 77 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AC008687.2-201ENST00000597865 520 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AC007566.2-201ENST00000603642 413 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AC097460.3-201ENST00000623099 442 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AL109659.3-201ENST00000624985 950 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AC007256.1-201ENST00000392253 2765 ntBASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.54□□□□□ -1.84
RPAP1Q9BWH6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 SNORA9.2-201ENST00000365361 133 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 U3.42-201ENST00000408746 214 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 RNU2-37P-201ENST00000410695 177 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 RN7SKP58-201ENST00000411010 305 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 RNU6-272P-201ENST00000411028 104 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 RNA5SP184-201ENST00000411071 108 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AC008173.1-201ENST00000418901 264 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AL590762.3-201ENST00000436372 640 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AL138799.3-201ENST00000438968 350 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 RPS26P30-201ENST00000443431 335 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 RPL29P29-201ENST00000448725 423 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AC015724.1-201ENST00000478577 156 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AC108860.1-201ENST00000484521 383 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 RNA5SP385-201ENST00000515947 110 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AC024153.1-201ENST00000603103 365 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AC016877.3-201ENST00000606778 504 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AC112503.1-201ENST00000608436 391 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 AC006213.5-201ENST00000619673 288 ntBASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RPAP1Q9BWH6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 MIR16-2-201ENST00000362117 81 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 MIR525-201ENST00000384978 85 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 AC241520.1-201ENST00000422654 1099 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 OR51AB1P-201ENST00000429046 620 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 PSMA2P3-201ENST00000429685 675 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 MTCO1P43-201ENST00000431831 488 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 AC092170.1-201ENST00000440211 356 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 RPL21P47-201ENST00000483696 477 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 SNX5P1-201ENST00000505757 1041 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms