Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SNRPEP10-201ENST00000420249 274 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 PIGFP2-201ENST00000421400 651 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 AC096632.1-201ENST00000427395 310 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 RPL23AP83-201ENST00000434984 473 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTPN18Q99952 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.04□□□□□ -1.6
PTPN18Q99952 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPN18Q99952 AC245028.2-201ENST00000458673 253 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 AC090686.1-201ENST00000481577 749 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 RNU6-583P-201ENST00000516012 92 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPN18Q99952 IFITM8P-201ENST00000522529 394 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.04□□□□□ -1.6
PTPN18Q99952 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.04□□□□□ -1.6
PTPN18Q99952 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTPN18Q99952 AL512360.1-201ENST00000555346 234 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.04□□□□□ -1.6
PTPN18Q99952 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPN18Q99952 MIR3682-201ENST00000581338 84 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPN18Q99952 AC008739.3-201ENST00000603262 127 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 AL161756.2-201ENST00000604597 246 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 AL035413.2-201ENST00000604801 525 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.04□□□□□ -1.6
PTPN18Q99952 AP001521.1-201ENST00000609150 300 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PTPN18Q99952 AL122125.1-201ENST00000616999 600 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 AC007546.1-201ENST00000619452 559 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.04□□□□□ -1.6
PTPN18Q99952 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.04□□□□□ -1.6
PTPN18Q99952 MIR3662-201ENST00000637030 95 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTPN18Q99952 AC106871.1-201ENST00000568324 3102 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.04□□□□□ -1.6
PTPN18Q99952 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.04□□□□□ -1.6
PTPN18Q99952 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTPN18Q99952 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTPN18Q99952 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.04□□□□□ -1.6
PTPN18Q99952 PHKBP1-201ENST00000450951 1951 ntBASIC5.04□□□□□ -1.6
PTPN18Q99952 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTPN18Q99952 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.03□□□□□ -1.6
PTPN18Q99952 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.03□□□□□ -1.6
PTPN18Q99952 ADAM24P-201ENST00000398655 2101 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTPN18Q99952 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.03□□□□□ -1.6
PTPN18Q99952 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.03□□□□□ -1.6
PTPN18Q99952 AL031595.2-201ENST00000624215 19071 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
PTPN18Q99952 RNU6-1085P-201ENST00000363576 107 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 Y_RNA.326-201ENST00000365176 113 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 RNU6-441P-201ENST00000384545 106 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 MIR449B-201ENST00000384995 97 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 AC073264.1-201ENST00000411508 416 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.03□□□□□ -1.6
PTPN18Q99952 AL035410.1-201ENST00000427409 427 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.03□□□□□ -1.6
PTPN18Q99952 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.03□□□□□ -1.6
PTPN18Q99952 RPL12P46-201ENST00000436610 195 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 RPL12P18-201ENST00000437175 325 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.03□□□□□ -1.6
PTPN18Q99952 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.03□□□□□ -1.6
PTPN18Q99952 AC104651.2-201ENST00000447549 528 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.03□□□□□ -1.6
PTPN18Q99952 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.03□□□□□ -1.6
PTPN18Q99952 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.03□□□□□ -1.6
PTPN18Q99952 FAM172BP-201ENST00000487497 1089 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.03□□□□□ -1.6
PTPN18Q99952 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PTPN18Q99952 AF131216.2-201ENST00000512316 564 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 AC010493.1-201ENST00000513479 292 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.03□□□□□ -1.6
PTPN18Q99952 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.03□□□□□ -1.6
PTPN18Q99952 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PTPN18Q99952 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.03□□□□□ -1.6
PTPN18Q99952 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.03□□□□□ -1.6
PTPN18Q99952 DYNLL1P4-201ENST00000549314 266 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.03□□□□□ -1.6
PTPN18Q99952 AL359212.1-201ENST00000556608 614 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.03□□□□□ -1.6
PTPN18Q99952 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.03□□□□□ -1.6
PTPN18Q99952 NRBF2P1-201ENST00000587407 859 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 FAM27D1-201ENST00000612308 341 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 AC243773.3-201ENST00000613270 256 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.03□□□□□ -1.6
PTPN18Q99952 PISRT1-201ENST00000626175 531 ntBASIC5.03□□□□□ -1.6
PTPN18Q99952 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
PTPN18Q99952 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.03□□□□□ -1.6
PTPN18Q99952 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PTPN18Q99952 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PTPN18Q99952 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN18Q99952 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN18Q99952 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN18Q99952 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PTPN18Q99952 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN18Q99952 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN18Q99952 Y_RNA.1-201ENST00000352915 104 ntBASIC5.02□□□□□ -1.61
PTPN18Q99952 Y_RNA.72-201ENST00000362894 103 ntBASIC5.02□□□□□ -1.61
PTPN18Q99952 U8.14-201ENST00000390843 143 ntBASIC5.02□□□□□ -1.61
PTPN18Q99952 RNU6-332P-201ENST00000391193 108 ntBASIC5.02□□□□□ -1.61
PTPN18Q99952 AC097374.1-203ENST00000400783 485 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms