Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.95□□□□□ -2.1
COL12A1Q99715 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.95□□□□□ -2.1
COL12A1Q99715 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL12A1Q99715 HMGB3P8-201ENST00000449709 577 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 AC002553.2-201ENST00000453217 340 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 AC126182.1-201ENST00000478134 357 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.95□□□□□ -2.1
COL12A1Q99715 MTCYBP20-201ENST00000524239 1129 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.95□□□□□ -2.1
COL12A1Q99715 AC002984.1-201ENST00000591692 448 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.95□□□□□ -2.1
COL12A1Q99715 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC1.95□□□□□ -2.1
COL12A1Q99715 SNORA25.6-201ENST00000364121 118 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 AL162578.1-201ENST00000406202 378 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.94□□□□□ -2.1
COL12A1Q99715 RNA5SP296-201ENST00000410523 111 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 AC004965.1-201ENST00000413033 213 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.94□□□□□ -2.1
COL12A1Q99715 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.94□□□□□ -2.1
COL12A1Q99715 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.94□□□□□ -2.1
COL12A1Q99715 AC092991.1-201ENST00000477176 376 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 AC093278.1-201ENST00000494700 600 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 AC104090.1-201ENST00000506341 1171 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.94□□□□□ -2.1
COL12A1Q99715 MIR6895-201ENST00000613497 78 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.94□□□□□ -2.1
COL12A1Q99715 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
COL12A1Q99715 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
COL12A1Q99715 Y_RNA.327-201ENST00000365201 102 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 RNU6-342P-201ENST00000384521 104 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 OR52A4P-203ENST00000498233 1014 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 LRRC37A5P-203ENST00000580181 585 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 MIR4285-201ENST00000581001 85 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 MIR5007-201ENST00000583098 95 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 AC007620.3-201ENST00000608131 497 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
COL12A1Q99715 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL12A1Q99715 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.94□□□□□ -2.1
COL12A1Q99715 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL12A1Q99715 OR4K11P-201ENST00000431829 904 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
COL12A1Q99715 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.94□□□□□ -2.1
COL12A1Q99715 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.94□□□□□ -2.1
COL12A1Q99715 AC010546.1-201ENST00000569391 485 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.94□□□□□ -2.1
COL12A1Q99715 AC108479.2-201ENST00000617314 601 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 AL353746.1-201ENST00000566293 6881 ntBASIC1.94□□□□□ -2.1
COL12A1Q99715 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
COL12A1Q99715 RNU1-87P-201ENST00000363727 170 ntBASIC1.93□□□□□ -2.1
COL12A1Q99715 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL12A1Q99715 AMD1P2-201ENST00000412936 992 ntBASIC1.93□□□□□ -2.1
COL12A1Q99715 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.93□□□□□ -2.1
COL12A1Q99715 AL606490.7-201ENST00000433136 191 ntBASIC1.93□□□□□ -2.1
COL12A1Q99715 OR10D4P-201ENST00000525892 951 ntBASIC1.93□□□□□ -2.1
COL12A1Q99715 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.93□□□□□ -2.1
COL12A1Q99715 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.93□□□□□ -2.1
COL12A1Q99715 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC1.93□□□□□ -2.1
COL12A1Q99715 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.93□□□□□ -2.1
COL12A1Q99715 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL12A1Q99715 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
COL12A1Q99715 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL12A1Q99715 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.93□□□□□ -2.1
COL12A1Q99715 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.93□□□□□ -2.1
COL12A1Q99715 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC1.93□□□□□ -2.1
COL12A1Q99715 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.93□□□□□ -2.1
COL12A1Q99715 RNA5SP380-201ENST00000517190 98 ntBASIC1.93□□□□□ -2.1
COL12A1Q99715 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC1.93□□□□□ -2.1
COL12A1Q99715 AC123904.3-201ENST00000547218 814 ntBASIC1.93□□□□□ -2.1
COL12A1Q99715 AL731537.2-201ENST00000561565 951 ntBASIC1.93□□□□□ -2.1
COL12A1Q99715 AC110741.2-201ENST00000605278 268 ntBASIC1.93□□□□□ -2.1
COL12A1Q99715 MIR3199-2-201ENST00000636243 86 ntBASIC1.93□□□□□ -2.1
COL12A1Q99715 AC107027.3-201ENST00000565095 3473 ntBASIC1.93□□□□□ -2.1
COL12A1Q99715 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
COL12A1Q99715 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
COL12A1Q99715 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COL12A1Q99715 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC1.93□□□□□ -2.1
COL12A1Q99715 RNA5SP383-201ENST00000362934 120 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 RPS7P2-201ENST00000435134 607 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.92□□□□□ -2.1
COL12A1Q99715 AC092851.1-201ENST00000535964 478 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 MIR4452-201ENST00000583004 71 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.92□□□□□ -2.1
COL12A1Q99715 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
COL12A1Q99715 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL12A1Q99715 RN7SKP247-201ENST00000411094 308 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 RPS15AP6-201ENST00000420703 385 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL12A1Q99715 RPL38P4-201ENST00000502376 214 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.92□□□□□ -2.1
COL12A1Q99715 SCARNA16.3-201ENST00000516595 184 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC1.92□□□□□ -2.1
COL12A1Q99715 AL354943.1-201ENST00000572103 781 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 AC103710.1-201ENST00000610003 901 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 AC004825.2-201ENST00000616634 455 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 MIR6515-201ENST00000619843 57 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
COL12A1Q99715 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL12A1Q99715 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms