Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC122134.1-201ENST00000565664 1104 ntBASIC2.14□□□□□ -2.07
VPS13AQ96RL7 AC092628.2-201ENST00000622492 339 ntBASIC2.14□□□□□ -2.07
VPS13AQ96RL7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS13AQ96RL7 AC016717.2-201ENST00000609089 5141 ntBASIC2.13□□□□□ -2.07
VPS13AQ96RL7 AC008432.1-201ENST00000615912 1320 ntBASIC2.13□□□□□ -2.07
VPS13AQ96RL7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13AQ96RL7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13AQ96RL7 AC233279.1-201ENST00000455300 423 ntBASIC2.13□□□□□ -2.07
VPS13AQ96RL7 PDCL2P2-201ENST00000533651 189 ntBASIC2.13□□□□□ -2.07
VPS13AQ96RL7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13AQ96RL7 MIR5007-201ENST00000583098 95 ntBASIC2.13□□□□□ -2.07
VPS13AQ96RL7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS13AQ96RL7 RNU6-707P-201ENST00000364647 95 ntBASIC2.13□□□□□ -2.07
VPS13AQ96RL7 FGF7P8-201ENST00000402994 292 ntBASIC2.13□□□□□ -2.07
VPS13AQ96RL7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS13AQ96RL7 AL513175.2-201ENST00000422071 443 ntBASIC2.13□□□□□ -2.07
VPS13AQ96RL7 AC092427.1-202ENST00000430569 476 ntBASIC2.13□□□□□ -2.07
VPS13AQ96RL7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13AQ96RL7 RPL23AP14-201ENST00000468281 468 ntBASIC2.13□□□□□ -2.07
VPS13AQ96RL7 LINC00888-204ENST00000487386 421 ntBASIC2.13□□□□□ -2.07
VPS13AQ96RL7 AC007182.2-201ENST00000489251 402 ntBASIC2.13□□□□□ -2.07
VPS13AQ96RL7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.13□□□□□ -2.07
VPS13AQ96RL7 AMZ2P1-203ENST00000565833 850 ntBASIC2.13□□□□□ -2.07
VPS13AQ96RL7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
VPS13AQ96RL7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13AQ96RL7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 RPS7P9-201ENST00000414704 586 ntBASIC2.12□□□□□ -2.07
VPS13AQ96RL7 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 AC004263.1-201ENST00000479327 332 ntBASIC2.12□□□□□ -2.07
VPS13AQ96RL7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 AC245517.5-201ENST00000611529 162 ntBASIC2.12□□□□□ -2.07
VPS13AQ96RL7 ADAM3A-203ENST00000461344 2157 ntBASIC2.12□□□□□ -2.07
VPS13AQ96RL7 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 OR52A4P-203ENST00000498233 1014 ntBASIC2.12□□□□□ -2.07
VPS13AQ96RL7 AL451074.6-201ENST00000608512 729 ntBASIC2.12□□□□□ -2.07
VPS13AQ96RL7 AC009831.4-201ENST00000620744 325 ntBASIC2.12□□□□□ -2.07
VPS13AQ96RL7 AC010872.1-201ENST00000624225 675 ntBASIC2.12□□□□□ -2.07
VPS13AQ96RL7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 NR1H5P-201ENST00000452683 1377 ntBASIC2.12□□□□□ -2.07
VPS13AQ96RL7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 RPL21P71-201ENST00000465598 459 ntBASIC2.12□□□□□ -2.07
VPS13AQ96RL7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 OR5D17P-201ENST00000531492 978 ntBASIC2.12□□□□□ -2.07
VPS13AQ96RL7 MIR6733-201ENST00000635723 61 ntBASIC2.12□□□□□ -2.07
VPS13AQ96RL7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13AQ96RL7 AL445437.1-201ENST00000623157 3087 ntBASIC2.11□□□□□ -2.07
VPS13AQ96RL7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS13AQ96RL7 AC002543.1-201ENST00000299783 1954 ntBASIC2.11□□□□□ -2.07
VPS13AQ96RL7 AL353746.1-201ENST00000566293 6881 ntBASIC2.11□□□□□ -2.07
VPS13AQ96RL7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS13AQ96RL7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS13AQ96RL7 RPL21P134-201ENST00000453468 483 ntBASIC2.11□□□□□ -2.07
VPS13AQ96RL7 RPL38P4-201ENST00000502376 214 ntBASIC2.11□□□□□ -2.07
VPS13AQ96RL7 AC123904.3-201ENST00000547218 814 ntBASIC2.11□□□□□ -2.07
VPS13AQ96RL7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS13AQ96RL7 AC012182.1-201ENST00000570133 895 ntBASIC2.11□□□□□ -2.07
VPS13AQ96RL7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS13AQ96RL7 AC091953.2-201ENST00000623979 160 ntBASIC2.11□□□□□ -2.07
VPS13AQ96RL7 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.11□□□□□ -2.07
VPS13AQ96RL7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
VPS13AQ96RL7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.11□□□□□ -2.07
VPS13AQ96RL7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13AQ96RL7 MIR181B1-201ENST00000385240 110 ntBASIC2.11□□□□□ -2.07
VPS13AQ96RL7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS13AQ96RL7 OR4K11P-201ENST00000431829 904 ntBASIC2.11□□□□□ -2.07
VPS13AQ96RL7 OR10D4P-201ENST00000525892 951 ntBASIC2.11□□□□□ -2.07
VPS13AQ96RL7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS13AQ96RL7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13AQ96RL7 Y_RNA.224-201ENST00000364308 111 ntBASIC2.1□□□□□ -2.07
VPS13AQ96RL7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13AQ96RL7 MIR9-3-201ENST00000385084 90 ntBASIC2.1□□□□□ -2.07
VPS13AQ96RL7 AC004965.1-201ENST00000413033 213 ntBASIC2.1□□□□□ -2.07
VPS13AQ96RL7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13AQ96RL7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13AQ96RL7 AC090543.1-201ENST00000492168 485 ntBASIC2.1□□□□□ -2.07
VPS13AQ96RL7 OR7K1P-201ENST00000546439 926 ntBASIC2.1□□□□□ -2.07
VPS13AQ96RL7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.1□□□□□ -2.07
VPS13AQ96RL7 AL163540.1-201ENST00000485382 386 ntBASIC2.1□□□□□ -2.07
VPS13AQ96RL7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.1□□□□□ -2.07
VPS13AQ96RL7 AC005296.1-201ENST00000616145 209 ntBASIC2.1□□□□□ -2.07
VPS13AQ96RL7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13AQ96RL7 AL354719.1-201ENST00000406535 843 ntBASIC2.1□□□□□ -2.07
VPS13AQ96RL7 AC147055.1-201ENST00000509261 750 ntBASIC2.1□□□□□ -2.07
VPS13AQ96RL7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13AQ96RL7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.1□□□□□ -2.07
VPS13AQ96RL7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
VPS13AQ96RL7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
VPS13AQ96RL7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VPS13AQ96RL7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms