Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AL590240.1-201ENST00000334118 313 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 SNORD116-2-201ENST00000384274 95 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 SNORD116-6-201ENST00000384711 96 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 SPTLC1P2-201ENST00000407089 121 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 RNA5SP113-201ENST00000410486 84 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 TPMTP3-201ENST00000411928 735 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 PGBD4P8-201ENST00000412993 562 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 BX510359.3-201ENST00000422168 306 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 RPL37P21-201ENST00000435890 276 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC083863.1-201ENST00000438811 231 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 RPL23AP93-201ENST00000440847 484 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 SNORD121B-201ENST00000458838 81 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 snoU13.4-201ENST00000458916 104 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 RPL9P32-201ENST00000464118 620 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC004453.1-201ENST00000487895 408 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 OR2A20P-203ENST00000498397 1268 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 MTCO1P49-201ENST00000523429 802 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AL121576.1-201ENST00000556055 276 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AL590229.1-201ENST00000603497 542 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC105129.3-201ENST00000605455 485 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC092354.1-201ENST00000606057 376 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC026422.1-201ENST00000623961 452 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 AC140479.6-201ENST00000633535 357 ntBASIC3.87□□□□□ -1.79
NR1H4Q96RI1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1H4Q96RI1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 RIOK3P1-201ENST00000418778 1528 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 CEP170P1-201ENST00000502249 4587 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 RN7SKP149-201ENST00000363008 344 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 RNU6-173P-201ENST00000364215 104 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 MIR184-201ENST00000384962 84 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 MIR3065-201ENST00000390137 79 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 U3.20-201ENST00000390909 217 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 RN7SKP100-201ENST00000411258 284 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 RPL7P8-201ENST00000411964 730 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 FAR2P2-201ENST00000413041 594 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 BX119904.4-201ENST00000424402 301 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AL365184.2-201ENST00000431139 435 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AC005154.2-201ENST00000438110 379 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 CDC27P1-201ENST00000445384 715 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 Z83846.1-201ENST00000446798 265 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AC091685.2-201ENST00000454924 864 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 RPL21P104-201ENST00000464143 478 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 RPS4XP14-201ENST00000493072 781 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AL139099.1-201ENST00000497398 403 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 RPL23AP55-201ENST00000498163 452 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 HMGB1P22-201ENST00000505315 124 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 KLHL2P1-201ENST00000508691 521 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AC017037.2-201ENST00000513850 890 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AC116347.2-201ENST00000514912 523 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 RNU6-528P-201ENST00000516926 100 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AC034268.2-201ENST00000571784 482 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H4Q96RI1 TPMTP1-201ENST00000592307 737 ntBASIC3.86□□□□□ -1.79
NR1H4Q96RI1 AL512782.1-201ENST00000603093 364 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms