Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC103858.2-201ENST00000621471 543 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC009268.2-201ENST00000621925 457 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC138Q96M89 USP8P1-201ENST00000494673 3183 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC138Q96M89 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC138Q96M89 Y_RNA.51-201ENST00000362725 102 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 RNA5SP307-201ENST00000362863 116 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 Y_RNA.201-201ENST00000364052 96 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 MIR23A-201ENST00000385245 73 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 SNORD115.1-201ENST00000391109 76 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 RPS20P2-201ENST00000402520 389 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 RNU2-43P-201ENST00000410306 190 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 Y_RNA.598-201ENST00000410480 95 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 RPS7P13-201ENST00000413955 498 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC119751.6-201ENST00000416712 186 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 DUTP6-201ENST00000425573 462 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 RPL21P66-201ENST00000426566 466 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 RPL23AP1-201ENST00000428990 471 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 OR4K11P-201ENST00000431829 904 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 MTND1P28-201ENST00000435623 950 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 AP000936.2-201ENST00000447151 681 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 ST13P20-201ENST00000447996 1065 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 DNAJC19P1-201ENST00000455312 319 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 RNU6-956P-201ENST00000458868 103 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 RPS27AP17-201ENST00000463344 455 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 RPL23AP41-201ENST00000484754 458 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC010424.1-201ENST00000506336 297 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 MLLT10P2-201ENST00000506434 249 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 RN7SKP92-201ENST00000517266 244 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 AP002748.2-201ENST00000528671 348 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC022878.1-201ENST00000530684 149 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 OR5D17P-201ENST00000531492 978 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 AP000873.5-201ENST00000533906 236 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 AP001429.1-201ENST00000602568 530 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 AL359999.1-201ENST00000604513 294 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC010201.1-201ENST00000605051 540 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 MIR6820-201ENST00000611508 62 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC104010.1-201ENST00000616889 150 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 MIR6130-201ENST00000619419 109 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC138Q96M89 AC244258.1-201ENST00000637553 1071 ntBASIC4.34□□□□□ -1.71
CCDC138Q96M89 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC138Q96M89 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
CCDC138Q96M89 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC138Q96M89 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC138Q96M89 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC138Q96M89 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC138Q96M89 RNA5SP22-201ENST00000365393 109 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC138Q96M89 Y_RNA.553-201ENST00000384670 102 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 RPL7P25-201ENST00000404151 721 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 Y_RNA.608-201ENST00000410647 95 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 SNORA74C-2-201ENST00000411179 201 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 RPL7AP25-201ENST00000423357 805 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC233728.2-201ENST00000425348 757 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC010153.1-201ENST00000432862 727 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC138Q96M89 AL138799.3-201ENST00000438968 350 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AL138878.2-201ENST00000440581 1241 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AL359073.1-201ENST00000448036 403 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC007967.1-201ENST00000455422 1159 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 snoU13.4-201ENST00000458916 104 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC004069.2-201ENST00000505438 1114 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 MTND4P2-201ENST00000507767 1203 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC006499.6-201ENST00000511169 607 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 RNU6-201P-201ENST00000517100 61 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms