Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 PCMTD1P2-201ENST00000565017 355 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AC091805.2-201ENST00000603848 235 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AC012603.1-201ENST00000606424 528 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 RNU1-30P-201ENST00000606575 163 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AC068944.2-201ENST00000610373 403 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AL158196.1-201ENST00000616786 434 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AL160394.1-201ENST00000624765 724 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 CR392039.4-201ENST00000624968 501 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 MTCO1P14-201ENST00000441695 1559 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
CCDC17Q96LX7 AC090971.4-201ENST00000560291 1800 ntBASIC4.46□□□□□ -1.69
CCDC17Q96LX7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC17Q96LX7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 FGF7P2-201ENST00000332473 296 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 RNA5SP52-201ENST00000362448 134 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 RNU6-501P-201ENST00000364072 100 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 MIR708-201ENST00000390708 88 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 SYF2P2-201ENST00000417620 583 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AL953862.1-201ENST00000423016 168 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AC233981.1-201ENST00000423224 461 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AC010975.2-201ENST00000427781 588 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AC011742.1-201ENST00000431448 434 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 ELOCP18-201ENST00000434209 337 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 UBE2FP3-201ENST00000436366 524 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 RPL26P28-201ENST00000451325 435 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 UBDP1-202ENST00000457888 382 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AC013828.1-201ENST00000481845 158 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AC007991.1-201ENST00000522680 631 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AC239860.2-201ENST00000525886 270 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AP003392.2-201ENST00000527269 208 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 CYCSP2-201ENST00000558168 301 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 MIR4801-201ENST00000582704 82 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 VN1R84P-201ENST00000593697 235 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 NDUFA8P1-201ENST00000605525 367 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 SNORA62.6-201ENST00000606322 83 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AC092447.7-201ENST00000422212 1621 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.46□□□□□ -1.7
CCDC17Q96LX7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC17Q96LX7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC17Q96LX7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC17Q96LX7 AC134882.1-201ENST00000603738 1676 ntBASIC4.45□□□□□ -1.7
CCDC17Q96LX7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CCDC17Q96LX7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC17Q96LX7 TEX21P-201ENST00000447107 1476 ntBASIC4.45□□□□□ -1.7
CCDC17Q96LX7 LINC02471-203ENST00000641941 4752 ntBASIC4.45□□□□□ -1.7
CCDC17Q96LX7 SNORA71.3-201ENST00000362582 128 ntBASIC4.45□□□□□ -1.7
CCDC17Q96LX7 RNU6-984P-201ENST00000363236 109 ntBASIC4.45□□□□□ -1.7
CCDC17Q96LX7 RNU6-1122P-201ENST00000384449 107 ntBASIC4.45□□□□□ -1.7
CCDC17Q96LX7 HSPD1P16-201ENST00000402302 394 ntBASIC4.45□□□□□ -1.7
CCDC17Q96LX7 FCF1P9-201ENST00000412546 282 ntBASIC4.45□□□□□ -1.7
CCDC17Q96LX7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC17Q96LX7 AL035423.1-201ENST00000420331 213 ntBASIC4.45□□□□□ -1.7
CCDC17Q96LX7 FNDC3CP-201ENST00000420795 1155 ntBASIC4.45□□□□□ -1.7
CCDC17Q96LX7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC17Q96LX7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC17Q96LX7 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC17Q96LX7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC17Q96LX7 AL162388.1-201ENST00000450912 352 ntBASIC4.45□□□□□ -1.7
CCDC17Q96LX7 SSXP1-201ENST00000453640 473 ntBASIC4.45□□□□□ -1.7
CCDC17Q96LX7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC17Q96LX7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms