Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.9□□□□□ -1.46
ZNF428Q96B54 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF428Q96B54 Y_RNA.6-201ENST00000362350 114 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 RNU6-259P-201ENST00000383999 107 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 RNU4-65P-201ENST00000410473 140 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 RNU4-25P-201ENST00000410569 230 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 SNRPFP1-201ENST00000414761 252 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 AC092832.1-201ENST00000422934 400 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF428Q96B54 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.9□□□□□ -1.46
ZNF428Q96B54 RPL21P112-201ENST00000434403 463 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 RAC1P7-201ENST00000445367 377 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.9□□□□□ -1.46
ZNF428Q96B54 GAPDHP17-201ENST00000449858 1001 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 AC096751.1-202ENST00000502691 1067 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.9□□□□□ -1.46
ZNF428Q96B54 AC010493.1-201ENST00000513479 292 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 AP003072.2-201ENST00000527756 676 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 AP000857.1-201ENST00000532151 543 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.9□□□□□ -1.46
ZNF428Q96B54 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.9□□□□□ -1.46
ZNF428Q96B54 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.9□□□□□ -1.46
ZNF428Q96B54 AL590392.1-201ENST00000604960 446 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 AC090948.1-201ENST00000607464 549 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 AC007038.2-201ENST00000608095 740 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 AC012150.2-201ENST00000621300 544 ntBASIC5.9□□□□□ -1.46
ZNF428Q96B54 RAD17P1-201ENST00000418130 2042 ntBASIC5.9□□□□□ -1.47
ZNF428Q96B54 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.9□□□□□ -1.47
ZNF428Q96B54 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ZNF428Q96B54 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ZNF428Q96B54 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
ZNF428Q96B54 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
ZNF428Q96B54 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.9□□□□□ -1.47
ZNF428Q96B54 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF428Q96B54 LINC00622-201ENST00000562811 1570 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF428Q96B54 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 OR52B1P-201ENST00000316506 909 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 RNU6-432P-201ENST00000384196 109 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 UQCRBP1-201ENST00000421129 336 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 TIMM9P3-201ENST00000428659 274 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 C8orf59P1-201ENST00000429930 303 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 USP9YP14-201ENST00000430663 563 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 USP9YP15-201ENST00000442391 422 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 AL022238.1-201ENST00000442557 355 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 MTND1P1-201ENST00000445453 368 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 RPS24P6-201ENST00000452670 400 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 RPL36AP13-201ENST00000457490 317 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 TPT1P7-201ENST00000458300 517 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 TMED11P-201ENST00000479478 690 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 AC078918.1-201ENST00000498515 228 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 MTND2P33-201ENST00000506452 1031 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 AC026801.2-201ENST00000515352 425 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 AP003122.4-201ENST00000530980 758 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 AC245505.1-201ENST00000556398 224 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 BPIFA4P-203ENST00000603168 689 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 AC233280.2-201ENST00000603917 1070 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 AC008277.2-201ENST00000605196 797 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF428Q96B54 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF428Q96B54 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF428Q96B54 AL157700.1-201ENST00000561973 1432 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.89□□□□□ -1.47
ZNF428Q96B54 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF428Q96B54 CPHL1P-201ENST00000461341 3407 ntBASIC5.89□□□□□ -1.47
ZNF428Q96B54 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF428Q96B54 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
ZNF428Q96B54 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC5.88□□□□□ -1.47
ZNF428Q96B54 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.88□□□□□ -1.47
ZNF428Q96B54 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF428Q96B54 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ZNF428Q96B54 MIR19A-201ENST00000384878 82 ntBASIC5.88□□□□□ -1.47
ZNF428Q96B54 MIR129-1-201ENST00000384972 72 ntBASIC5.88□□□□□ -1.47
ZNF428Q96B54 RNU2-43P-201ENST00000410306 190 ntBASIC5.88□□□□□ -1.47
ZNF428Q96B54 AL031779.1-201ENST00000415663 330 ntBASIC5.88□□□□□ -1.47
ZNF428Q96B54 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.88□□□□□ -1.47
ZNF428Q96B54 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.88□□□□□ -1.47
ZNF428Q96B54 AL359385.1-201ENST00000456509 365 ntBASIC5.88□□□□□ -1.47
ZNF428Q96B54 AC108022.1-201ENST00000493466 478 ntBASIC5.88□□□□□ -1.47
ZNF428Q96B54 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.88□□□□□ -1.47
ZNF428Q96B54 AC113430.1-201ENST00000506872 718 ntBASIC5.88□□□□□ -1.47
ZNF428Q96B54 AC091133.4-201ENST00000511142 308 ntBASIC5.88□□□□□ -1.47
ZNF428Q96B54 FTH1P21-201ENST00000512179 511 ntBASIC5.88□□□□□ -1.47
ZNF428Q96B54 RNU6-430P-201ENST00000517078 107 ntBASIC5.88□□□□□ -1.47
ZNF428Q96B54 AC100870.1-201ENST00000522035 505 ntBASIC5.88□□□□□ -1.47
ZNF428Q96B54 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.88□□□□□ -1.47
ZNF428Q96B54 MED28P5-201ENST00000528254 438 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms