Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UBE2E3Q969T4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 RNU6-328P-201ENST00000390887 106 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 RNU6-1300P-201ENST00000391046 108 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AC016769.3-201ENST00000396562 315 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 RPL23AP47-201ENST00000408017 460 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 RNU6-712P-201ENST00000410558 100 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 RN7SKP27-201ENST00000410684 333 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 RNU4-47P-201ENST00000410876 114 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AC007899.1-201ENST00000412776 775 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 GTF2IP23-201ENST00000423746 351 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 GDI2P1-201ENST00000429312 1336 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 BMS1P19-201ENST00000433925 393 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 PRDX3P3-201ENST00000447765 522 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 NECAP1P2-201ENST00000455668 727 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AC109925.1-201ENST00000478069 331 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AP001207.2-201ENST00000519490 539 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AP000619.3-201ENST00000535634 1127 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AC087897.1-201ENST00000550134 156 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 MTND4P34-201ENST00000572715 1371 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AL445435.1-201ENST00000604232 665 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 MIR6075-201ENST00000620782 95 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 AC109454.4-201ENST00000623411 649 ntBASIC3.06□□□□□ -1.92
UBE2E3Q969T4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.06□□□□□ -1.92
UBE2E3Q969T4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AL645568.2-201ENST00000432815 1337 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 RNU6-657P-201ENST00000383904 107 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 U3.29-201ENST00000391296 212 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 RNU2-28P-201ENST00000410457 189 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 RNA5SP293-201ENST00000410527 113 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 RPS7P9-201ENST00000414704 586 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AL353705.1-201ENST00000433468 480 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 HMGB1P25-201ENST00000468402 607 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 RN7SL601P-201ENST00000471221 293 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 RPL21P129-201ENST00000491732 478 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AC104629.1-201ENST00000494226 508 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 RNU1-143P-201ENST00000516296 146 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 RNA5SP468-201ENST00000516782 93 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AC008127.2-201ENST00000549925 1075 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AL389895.1-201ENST00000554127 252 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AC104072.1-201ENST00000568817 668 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AC092574.1-201ENST00000609771 420 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 U1.23-201ENST00000610293 146 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 RNU1-68P-201ENST00000615382 146 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AC138932.5-201ENST00000617759 563 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AC007275.1-201ENST00000621243 671 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 U1.39-201ENST00000621562 146 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AL157770.1-201ENST00000623049 439 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AP003476.1-201ENST00000623984 516 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 AC126544.2-201ENST00000625174 749 ntBASIC3.05□□□□□ -1.92
UBE2E3Q969T4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
UBE2E3Q969T4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
UBE2E3Q969T4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
UBE2E3Q969T4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
UBE2E3Q969T4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
UBE2E3Q969T4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBE2E3Q969T4 RNA5SP295-201ENST00000362655 121 ntBASIC3.04□□□□□ -1.92
UBE2E3Q969T4 SUGT1P1-201ENST00000379514 476 ntBASIC3.04□□□□□ -1.92
UBE2E3Q969T4 ARF4P3-201ENST00000397387 509 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms