Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SH3RF2Q8TEC5 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SH3RF2Q8TEC5 AL022322.2-201ENST00000624072 20397 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AL031595.2-201ENST00000624215 19071 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC005332.5-201ENST00000591222 2919 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 Y_RNA.142-201ENST00000363491 102 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 RNU6-767P-201ENST00000384132 107 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 Y_RNA.535-201ENST00000384612 99 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 MIR129-1-201ENST00000384972 72 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 CTSL3P-202ENST00000412179 788 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 RPS26P47-201ENST00000427219 348 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AL356276.2-201ENST00000435919 558 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC016691.1-201ENST00000441321 413 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 H2AFZP5-201ENST00000446960 382 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC140076.1-201ENST00000449897 361 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 RPS20P21-201ENST00000466859 343 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC022034.3-201ENST00000471393 478 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC139783.2-201ENST00000504847 1145 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 SNORA40.12-201ENST00000516329 111 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 RNA5SP337-201ENST00000517007 109 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 ARL2BPP2-201ENST00000550907 489 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AL138976.2-201ENST00000563989 694 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC018552.3-201ENST00000567416 561 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC018638.8-201ENST00000588755 281 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC013553.2-201ENST00000604244 589 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AL391813.2-201ENST00000609113 322 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC083809.1-201ENST00000615051 472 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC022106.2-201ENST00000620114 757 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC024940.5-201ENST00000622889 474 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 SOCS5P3-201ENST00000425115 1576 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 AC006484.1-201ENST00000435086 1884 ntBASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF2Q8TEC5 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 ZNF680P1-201ENST00000436625 1469 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 AC139713.2-214ENST00000642059 1811 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 Y_RNA.356-201ENST00000365475 113 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 RNU6-116P-201ENST00000384042 109 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 RNU2-15P-201ENST00000410692 191 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 RNU2-62P-201ENST00000410868 191 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 RPS20P15-201ENST00000412792 311 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 SDCBPP3-201ENST00000419629 891 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 AC007283.2-201ENST00000424739 197 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 RPEP3-201ENST00000425462 676 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 AL353597.2-202ENST00000434901 373 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 MTND1P9-201ENST00000453775 944 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 RN7SL385P-201ENST00000468873 276 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 AC090686.1-201ENST00000481577 749 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 SNORD60.2-201ENST00000516883 86 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 IGLVIV-53-201ENST00000520107 367 ntBASIC4.88□□□□□ -1.63
SH3RF2Q8TEC5 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms