Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.67□□□□□ -1.66
CCHCR1Q8TD31 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCHCR1Q8TD31 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCHCR1Q8TD31 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCHCR1Q8TD31 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
CCHCR1Q8TD31 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
CCHCR1Q8TD31 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCHCR1Q8TD31 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 PNPT1P2-201ENST00000456768 2050 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 LINC00622-201ENST00000562811 1570 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 GNG5P1-201ENST00000255500 204 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 RN7SKP106-201ENST00000410832 272 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 RPS15AP40-201ENST00000419621 391 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 PIGFP2-201ENST00000421400 651 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AL353777.1-201ENST00000425552 326 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AL035410.1-201ENST00000427409 427 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 TIMM9P3-201ENST00000428659 274 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AL359265.2-201ENST00000434367 631 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 SDCBPP1-201ENST00000440192 890 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC013267.1-201ENST00000458227 267 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AP001992.1-205ENST00000462248 379 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC022034.3-201ENST00000471393 478 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC093267.1-201ENST00000489176 961 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 HMGB1P21-201ENST00000502313 581 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC116353.2-201ENST00000505332 712 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 HMGB1P29-201ENST00000505659 499 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 Y_RNA.672-201ENST00000516289 104 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 RN7SKP82-201ENST00000516786 223 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 RPS3AP4-201ENST00000555161 764 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 MTCO3P24-201ENST00000572729 782 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 DUXAP4-201ENST00000603046 613 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 MIR6780A-201ENST00000615089 68 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC007014.2-201ENST00000615581 479 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AL596245.1-201ENST00000618994 362 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC068880.5-201ENST00000624331 290 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC110994.2-201ENST00000635481 492 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 AC244258.1-201ENST00000637553 1071 ntBASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCHCR1Q8TD31 MFSD8-242ENST00000641690 4199 ntBASIC4.65□□□□□ -1.66
CCHCR1Q8TD31 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCHCR1Q8TD31 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 OR4K15-201ENST00000305051 1216 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AC067945.1-201ENST00000342609 618 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 RNA5SP502-201ENST00000362694 119 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 Y_RNA.88-201ENST00000363029 99 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 RNU6-853P-201ENST00000364306 107 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 RPS16P5-201ENST00000406501 404 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AC078974.1-201ENST00000411597 223 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 BX295541.1-201ENST00000417774 250 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 RPL36AP36-201ENST00000418616 301 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AC069213.2-201ENST00000420238 366 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 USP9YP36-201ENST00000424581 829 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 PSMA6P3-201ENST00000428242 164 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 EZH2P1-201ENST00000431167 291 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AC000111.3-201ENST00000433478 193 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 MTCYBP45-201ENST00000435243 565 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 HLA-N-201ENST00000437516 135 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AC073264.2-201ENST00000448886 166 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AC079448.1-201ENST00000449377 373 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AL162591.2-201ENST00000449634 317 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 HMGB1P15-201ENST00000453854 435 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 PARP4P3-201ENST00000510265 317 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 SAP18P1-201ENST00000512058 390 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AC007016.1-201ENST00000512110 244 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 SNORD116-26-201ENST00000516006 96 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 NRON-201ENST00000517270 370 ntBASIC4.65□□□□□ -1.67
CCHCR1Q8TD31 AC022616.6-201ENST00000520479 119 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms