Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AL138878.1-201ENST00000405131 347 ntBASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 AC093151.1-201ENST00000427711 313 ntBASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 RPS4XP11-201ENST00000446897 772 ntBASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 AP001521.1-201ENST00000609150 300 ntBASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 GTF2IP23-201ENST00000423746 351 ntBASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 RPS15AP17-201ENST00000470598 390 ntBASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 AL163540.1-201ENST00000485382 386 ntBASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 OOSP1P2-201ENST00000579644 351 ntBASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC168Q8NDH2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 Y_RNA.68-201ENST00000362881 102 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 AL450263.2-201ENST00000439400 589 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 AC072039.1-201ENST00000477611 581 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 RNA5SP476-201ENST00000516613 103 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 HMGB1P1-201ENST00000522557 636 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 PDCL2P2-201ENST00000533651 189 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 RPL21P5-201ENST00000554662 472 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 AC005730.3-201ENST00000583067 366 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 AL078603.1-201ENST00000603824 313 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 AC245517.5-201ENST00000611529 162 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 MIR6504-201ENST00000613520 61 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 MTND4P10-201ENST00000446199 1363 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 RNU6-249P-201ENST00000363016 102 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 RNU6-457P-201ENST00000363999 107 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 AC105402.2-201ENST00000438503 358 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 AC005046.1-201ENST00000608515 625 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 AL391813.2-201ENST00000609113 322 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 MIR7973-1-201ENST00000614683 76 ntBASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC168Q8NDH2 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 OR52B1P-201ENST00000316506 909 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 RNA5SP502-201ENST00000362694 119 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 RNU6-1032P-201ENST00000384100 107 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 RPL21P3-201ENST00000395517 478 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 RNU4-62P-201ENST00000410125 130 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 MRPL50P4-201ENST00000446432 475 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 TRMT112P2-201ENST00000512910 132 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 CCNHP1-201ENST00000513311 678 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 AC012078.1-201ENST00000405035 1646 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 MTND5P19-201ENST00000424872 1794 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 SNORA67.3-201ENST00000384366 140 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 RPL31P1-201ENST00000398116 372 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 AL445213.1-201ENST00000412589 747 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 RN7SKP60-201ENST00000516985 239 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 AP005660.1-201ENST00000522972 293 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 AC005951.1-201ENST00000576706 485 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 MIR5007-201ENST00000583098 95 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 MIR6515-201ENST00000619843 57 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 MIR1291-201ENST00000627649 87 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 PHKBP1-201ENST00000450951 1951 ntBASIC1.9□□□□□ -2.11
CCDC168Q8NDH2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 OR11H5P-202ENST00000641612 1325 ntBASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 MTND5P3-201ENST00000438536 1800 ntBASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 TPMTP3-201ENST00000411928 735 ntBASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 AMD1P2-201ENST00000412936 992 ntBASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 AC009238.1-201ENST00000442165 424 ntBASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 EXTL2P1-201ENST00000446218 416 ntBASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 AC009237.6-201ENST00000446969 424 ntBASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 Z99129.2-201ENST00000619967 314 ntBASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC168Q8NDH2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms