Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 PTMAP3-201ENST00000447474 330 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 AL591623.2-201ENST00000449978 222 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 AL451050.1-201ENST00000450126 415 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 AC022431.1-201ENST00000450941 438 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 AC098824.1-201ENST00000453565 980 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 MTCYBP43-201ENST00000513621 740 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 RNU6-347P-201ENST00000516658 105 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 AC008562.1-201ENST00000521763 330 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 COX6B1P6-201ENST00000522347 255 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNE4Q8N205 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 AC004217.3-201ENST00000551552 878 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 CENPUP2-201ENST00000555897 1186 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 RPL21P12-201ENST00000559810 515 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNE4Q8N205 C8orf59P2-201ENST00000603441 271 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 AL442067.2-201ENST00000614033 363 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNE4Q8N205 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNE4Q8N205 AC105074.1-201ENST00000623380 3095 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNE4Q8N205 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNE4Q8N205 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 MTND4P16-201ENST00000466108 1367 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNE4Q8N205 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNE4Q8N205 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNE4Q8N205 Y_RNA.61-201ENST00000362835 102 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 RNU6-501P-201ENST00000364072 100 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 PTMAP5-201ENST00000393073 333 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 AL139098.1-201ENST00000407291 389 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 RPL23AP47-201ENST00000408017 460 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 SNORA3.3-201ENST00000408712 125 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 RNA5SP296-201ENST00000410523 111 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 RNU6-248P-201ENST00000410720 107 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 AC009237.2-201ENST00000421358 284 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 MTND1P14-201ENST00000427400 950 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 AC000111.3-201ENST00000433478 193 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 B3GNT2P1-201ENST00000434960 952 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 AC004865.1-201ENST00000442276 1003 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 RAB11AP1-201ENST00000442978 646 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 RNA5SP103-201ENST00000459503 118 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 RPL21P6-201ENST00000479171 504 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 AC105252.1-201ENST00000503089 286 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 SNX5P1-201ENST00000505757 1041 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 GMPSP1-201ENST00000514075 579 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 AC087369.1-201ENST00000520775 996 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 AP002453.2-201ENST00000533503 320 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 AC091834.1-201ENST00000614543 472 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 AC012150.2-201ENST00000621300 544 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNE4Q8N205 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SYNE4Q8N205 MAPK10-372ENST00000641954 3413 ntBASIC4.93□□□□□ -1.62
SYNE4Q8N205 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SYNE4Q8N205 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SYNE4Q8N205 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SYNE4Q8N205 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SYNE4Q8N205 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 MIR183-201ENST00000384958 110 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 MIR181A1-201ENST00000385026 110 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 snosnR66.1-201ENST00000391095 99 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 RPL23AP29-201ENST00000397284 453 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC138393.2-201ENST00000414742 246 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 RPL21P32-201ENST00000419877 477 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC093698.1-201ENST00000423843 571 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 FABP3P2-201ENST00000453169 399 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms