Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 RNU1-76P-201ENST00000362903 159 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 RN7SKP151-201ENST00000410230 316 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 EI24P4-201ENST00000423683 1078 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 RNU7-120P-201ENST00000459334 63 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 RN7SL552P-201ENST00000462094 276 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 RPL7P49-201ENST00000471402 708 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC044810.1-201ENST00000480271 711 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 RN7SL741P-201ENST00000482473 289 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 RPL30P11-201ENST00000495304 339 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 CBX3P4-201ENST00000538909 354 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 MT1CP-201ENST00000567054 174 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC020916.2-201ENST00000591242 360 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 MIR6864-201ENST00000617935 70 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AL137067.2-201ENST00000621202 131 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 AC129915.3-201ENST00000634128 948 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC116Q8IYX3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AC005725.1-201ENST00000577346 2607 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AL161756.3-201ENST00000641216 2071 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 RNU6-1266P-201ENST00000362794 105 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 RN7SKP171-201ENST00000364417 303 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 SNORA11.3-201ENST00000408471 128 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 EIF1P2-201ENST00000428233 350 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AC092423.1-201ENST00000430165 186 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 RPL23AP33-201ENST00000442301 452 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AL162389.1-201ENST00000449233 177 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AC022431.1-201ENST00000450941 438 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AL136097.1-201ENST00000456945 913 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 RPS27P20-201ENST00000492051 246 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 RN7SL649P-201ENST00000496974 275 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AC008958.1-201ENST00000511047 682 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 ZNF519P4-201ENST00000514008 125 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AP002392.1-201ENST00000537692 208 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AC126177.3-201ENST00000551839 688 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 RNU4ATAC-201ENST00000580972 127 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 SNORA11.6-201ENST00000619030 128 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 AL034546.1-201ENST00000623740 3693 ntBASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms