Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC007349.4-201ENST00000608114 532 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AP002782.1-201ENST00000623107 614 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 MIR4278-201ENST00000636094 69 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC006927.4-201ENST00000639187 543 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AL732372.2-225ENST00000642124 456 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 Y_RNA.25-201ENST00000362528 102 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 Y_RNA.192-201ENST00000363977 102 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 RNA5SP235-201ENST00000365411 114 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AL023807.1-201ENST00000407932 359 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 RNU6-55P-201ENST00000411092 107 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 RNU6-954P-201ENST00000411355 107 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 RPS24P7-201ENST00000416921 246 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 XKRYP1-201ENST00000423438 492 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 OR51AB1P-201ENST00000429046 620 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 PSMA2P3-201ENST00000429685 675 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AL158071.1-201ENST00000430315 461 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 XKRYP2-201ENST00000432915 492 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 COX7BP2-201ENST00000437976 242 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 RPS3AP46-201ENST00000448352 682 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 RPL29P29-201ENST00000448725 423 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AC104073.1-201ENST00000451988 151 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AC099563.1-201ENST00000456086 418 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 RNU2-58P-201ENST00000516403 183 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 OR5B10P-201ENST00000532869 642 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 MIR3200-201ENST00000580767 85 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AC005412.1-201ENST00000580812 1049 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AC091057.2-201ENST00000602594 792 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AC022022.2-201ENST00000602989 360 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 LLPHP1-201ENST00000603571 367 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AC113368.1-201ENST00000603736 382 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 ELOCP35-201ENST00000604289 336 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AC025588.2-201ENST00000604851 466 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 AL450489.1-201ENST00000612071 468 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71Q8IV32 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.34□□□□□ -1.87
CCDC71Q8IV32 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.34□□□□□ -1.88
CCDC71Q8IV32 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC71Q8IV32 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC71Q8IV32 MTCO1P24-201ENST00000515438 1558 ntBASIC3.34□□□□□ -1.88
CCDC71Q8IV32 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 AC130650.2-201ENST00000618736 2403 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 RNU6-216P-201ENST00000363282 104 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 Y_RNA.408-201ENST00000383987 102 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 RNVU1-14-201ENST00000384770 164 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 RNU2-28P-201ENST00000410457 189 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 ATP5F1P1-201ENST00000433775 569 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 BX679664.1-201ENST00000434429 253 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 ELOCP13-201ENST00000443934 329 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 RPS4XP2-201ENST00000458402 793 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 AC026427.2-201ENST00000506228 536 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 TMEM248P1-201ENST00000510579 951 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 AC079395.1-201ENST00000510981 262 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 EEF1A1P37-201ENST00000522748 715 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 AC023161.2-201ENST00000551218 780 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 AC061975.8-201ENST00000587058 721 ntBASIC3.33□□□□□ -1.88
CCDC71Q8IV32 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC71Q8IV32 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms