Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
USP48Q86UV5 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.74□□□□□ -1.49
USP48Q86UV5 AC009643.2-201ENST00000603543 1448 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP48Q86UV5 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
USP48Q86UV5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP48Q86UV5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.74□□□□□ -1.49
USP48Q86UV5 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.74□□□□□ -1.49
USP48Q86UV5 RNU6-282P-201ENST00000365357 103 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AL592291.1-201ENST00000403830 352 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AL139413.1-201ENST00000421309 217 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AC019097.1-201ENST00000424783 735 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 MTCO1P20-201ENST00000425366 358 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.74□□□□□ -1.49
USP48Q86UV5 BTF3P10-201ENST00000433415 495 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AC119618.1-201ENST00000434191 222 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 UBE2V1P13-201ENST00000436983 439 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.74□□□□□ -1.49
USP48Q86UV5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.74□□□□□ -1.49
USP48Q86UV5 AL359073.1-201ENST00000448036 403 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AC000111.2-201ENST00000448200 210 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 RPS4XP10-201ENST00000465034 731 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AC034236.1-201ENST00000469891 373 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AC021382.1-201ENST00000483523 359 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.74□□□□□ -1.49
USP48Q86UV5 RPS4XP18-201ENST00000495480 763 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AC010587.1-201ENST00000505809 469 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AP001781.1-201ENST00000530977 207 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.74□□□□□ -1.49
USP48Q86UV5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.74□□□□□ -1.49
USP48Q86UV5 AC025678.1-201ENST00000567861 338 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 FGF7P1-201ENST00000582820 288 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.74□□□□□ -1.49
USP48Q86UV5 AL009028.1-201ENST00000604895 802 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AC008536.2-201ENST00000607284 349 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 RNU4-89P-201ENST00000607443 133 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 ZYXP1-201ENST00000617638 118 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AC007742.2-201ENST00000618226 398 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 AC139792.3-201ENST00000623525 224 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 MIR1321-201ENST00000637766 79 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 MTND4P23-201ENST00000447723 1363 ntBASIC5.74□□□□□ -1.49
USP48Q86UV5 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
USP48Q86UV5 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP48Q86UV5 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
USP48Q86UV5 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP48Q86UV5 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.74□□□□□ -1.49
USP48Q86UV5 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
USP48Q86UV5 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.74□□□□□ -1.49
USP48Q86UV5 AL672167.1-203ENST00000641299 2975 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.73□□□□□ -1.49
USP48Q86UV5 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.73□□□□□ -1.49
USP48Q86UV5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USP48Q86UV5 SOCS5P3-201ENST00000425115 1576 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
USP48Q86UV5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
USP48Q86UV5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USP48Q86UV5 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USP48Q86UV5 USP12PX-201ENST00000432383 1057 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 DPPA3P1-201ENST00000448050 469 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 AL162591.2-201ENST00000449634 317 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 AC079382.1-201ENST00000493346 557 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.73□□□□□ -1.49
USP48Q86UV5 AC091868.1-201ENST00000508746 304 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 RN7SKP46-201ENST00000515942 234 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 Y_RNA.704-201ENST00000516851 102 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.73□□□□□ -1.49
USP48Q86UV5 CYCSP29-201ENST00000533731 318 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.73□□□□□ -1.49
USP48Q86UV5 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.73□□□□□ -1.49
USP48Q86UV5 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.73□□□□□ -1.49
USP48Q86UV5 AL049839.1-201ENST00000556151 657 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 SUB1P2-201ENST00000556401 297 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 AC093227.2-201ENST00000589357 285 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 AC068790.5-201ENST00000602741 355 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 ARF4P1-201ENST00000605447 541 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
USP48Q86UV5 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
USP48Q86UV5 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USP48Q86UV5 AC011460.1-201ENST00000636268 1834 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
USP48Q86UV5 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
USP48Q86UV5 ZNF734P-201ENST00000419494 1534 ntBASIC5.73□□□□□ -1.49
USP48Q86UV5 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.72□□□□□ -1.49
USP48Q86UV5 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
USP48Q86UV5 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.72□□□□□ -1.49
USP48Q86UV5 RAD17P1-201ENST00000418130 2042 ntBASIC5.72□□□□□ -1.49
USP48Q86UV5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USP48Q86UV5 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP48Q86UV5 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
USP48Q86UV5 AC138915.3-201ENST00000562908 1389 ntBASIC5.72□□□□□ -1.49
USP48Q86UV5 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
USP48Q86UV5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP48Q86UV5 AC011155.1-201ENST00000316512 456 ntBASIC5.72□□□□□ -1.49
USP48Q86UV5 Y_RNA.61-201ENST00000362835 102 ntBASIC5.72□□□□□ -1.49
USP48Q86UV5 Y_RNA.89-201ENST00000363031 102 ntBASIC5.72□□□□□ -1.49
USP48Q86UV5 SNORA73.1-201ENST00000363107 205 ntBASIC5.72□□□□□ -1.49
USP48Q86UV5 Y_RNA.481-201ENST00000384373 102 ntBASIC5.72□□□□□ -1.49
USP48Q86UV5 RNA5SP345-201ENST00000410646 108 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms