Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MFSD8-219ENST00000641228 2559 ntBASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD3Q7Z3D4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 RNA5SP107-201ENST00000411358 122 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 MRPL53P1-201ENST00000414323 319 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AL354766.1-201ENST00000423396 542 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 PSMA2P3-201ENST00000429685 675 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AL391987.1-201ENST00000441025 200 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 RPL23AP55-201ENST00000498163 452 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AC007991.1-201ENST00000522680 631 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AP003733.2-201ENST00000529409 171 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AP000648.1-201ENST00000529682 397 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AC015720.2-201ENST00000567709 334 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AC007342.5-201ENST00000571340 2142 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 MIR4293-201ENST00000584305 78 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AL138889.2-201ENST00000603883 242 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AC010900.2-201ENST00000604508 210 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 AC130454.1-201ENST00000622948 401 ntBASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD3Q7Z3D4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 SAMMSON-213ENST00000641336 1521 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AC020656.2-201ENST00000613291 5309 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AC108751.5-201ENST00000492880 1336 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AP004607.3-201ENST00000530354 3915 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 RN7SKP162-201ENST00000363605 345 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 RN7SKP69-201ENST00000365390 305 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 RNU6-125P-201ENST00000384505 107 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AC073410.1-201ENST00000435125 589 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 FTH1P2-201ENST00000466086 412 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AC007998.1-201ENST00000474156 672 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 RPL17P19-201ENST00000489069 552 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 RN7SL101P-201ENST00000496350 279 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 RNU2-69P-201ENST00000516061 100 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 RNU6-897P-201ENST00000517135 105 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AC008162.1-201ENST00000604718 254 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 AL670379.4-201ENST00000605279 254 ntBASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD3Q7Z3D4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
LYSMD3Q7Z3D4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
LYSMD3Q7Z3D4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
LYSMD3Q7Z3D4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms