Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TUBA1AQ71U36 AL158163.1-201ENST00000603915 1649 ntBASIC3.8□□□□□ -1.8
TUBA1AQ71U36 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TUBA1AQ71U36 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TUBA1AQ71U36 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
TUBA1AQ71U36 RIOK3P1-201ENST00000418778 1528 ntBASIC3.8□□□□□ -1.8
TUBA1AQ71U36 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.8□□□□□ -1.8
TUBA1AQ71U36 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 MTND4P16-201ENST00000466108 1367 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 Y_RNA.3-201ENST00000362331 103 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 RNA5SP175-201ENST00000364275 119 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 RNU6-444P-201ENST00000383988 108 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 SNORA75-201ENST00000384158 137 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 MIR506-201ENST00000384998 124 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 RNU2-28P-201ENST00000410457 189 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 COX6CP17-201ENST00000421389 185 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AL953862.1-201ENST00000423016 168 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 NIPA2P1-201ENST00000426223 976 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 MTCO3P30-201ENST00000426425 670 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 VDAC1P6-201ENST00000430062 855 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 UBE2FP3-201ENST00000436366 524 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 TXNP1-201ENST00000441872 371 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 CDC27P1-201ENST00000445384 715 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 RNU6-720P-201ENST00000516363 108 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AC006064.5-201ENST00000541782 248 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AC074051.3-201ENST00000570238 358 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 MIR548AB-201ENST00000584917 84 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AC107982.3-201ENST00000584957 985 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AC087683.1-201ENST00000591187 441 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AC079089.3-201ENST00000603094 673 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 HSPE1P14-201ENST00000605812 302 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 MIR6810-201ENST00000622701 70 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AC231657.1-201ENST00000624313 397 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AC025048.6-202ENST00000627667 438 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 Z82217.1-201ENST00000625157 8149 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 AL079343.1-201ENST00000572358 1771 ntBASIC3.79□□□□□ -1.8
TUBA1AQ71U36 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TUBA1AQ71U36 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 RNU1-18P-201ENST00000363062 164 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 RNU6-723P-201ENST00000383973 107 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 SNRPEP2-201ENST00000397592 279 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 MIR1179-201ENST00000408703 91 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 RNA5SP36-201ENST00000410197 133 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 AC008280.1-201ENST00000418851 412 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 RPL21P109-201ENST00000422213 475 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 AL365184.2-201ENST00000431139 435 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 HMGN2P21-201ENST00000447764 270 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 USP9YP10-201ENST00000454868 628 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 RN7SL303P-201ENST00000469773 251 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 AP002884.2-201ENST00000471647 395 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 AC011825.1-201ENST00000484967 388 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 CEACAMP10-202ENST00000495431 496 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 AC005921.1-201ENST00000510589 286 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 PHBP14-201ENST00000512887 367 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.78□□□□□ -1.8
TUBA1AQ71U36 RNA5SP519-201ENST00000516480 119 ntBASIC3.78□□□□□ -1.8
TUBA1AQ71U36 RN7SKP96-201ENST00000516948 297 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms