Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
KRT40Q6A162 MAPK10-304ENST00000641341 3984 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRT40Q6A162 AL606537.1-201ENST00000607258 2011 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.95□□□□□ -1.62
KRT40Q6A162 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRT40Q6A162 AC083843.3-201ENST00000623679 2186 ntBASIC4.95□□□□□ -1.62
KRT40Q6A162 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
KRT40Q6A162 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.95□□□□□ -1.62
KRT40Q6A162 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
KRT40Q6A162 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRT40Q6A162 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.95□□□□□ -1.62
KRT40Q6A162 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
KRT40Q6A162 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRT40Q6A162 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
KRT40Q6A162 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.94□□□□□ -1.62
KRT40Q6A162 Y_RNA.9-201ENST00000362354 101 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 SNORA71.3-201ENST00000362582 128 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 RNU6-984P-201ENST00000363236 109 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
KRT40Q6A162 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.94□□□□□ -1.62
KRT40Q6A162 RNU6-769P-201ENST00000384407 104 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
KRT40Q6A162 MTCO3P40-201ENST00000392516 676 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AL590002.1-201ENST00000406554 418 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 Y_RNA.608-201ENST00000410647 95 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 RNU6-628P-201ENST00000410675 107 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AC138393.2-201ENST00000414742 246 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AC008280.1-201ENST00000418851 412 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT40Q6A162 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT40Q6A162 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.94□□□□□ -1.62
KRT40Q6A162 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.94□□□□□ -1.62
KRT40Q6A162 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT40Q6A162 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.94□□□□□ -1.62
KRT40Q6A162 MTND4P28-201ENST00000426217 387 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT40Q6A162 MTND3P23-201ENST00000431980 347 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AL358934.1-201ENST00000432346 324 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AC011998.1-201ENST00000433403 117 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 CEACAMP1-201ENST00000434624 1035 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.94□□□□□ -1.62
KRT40Q6A162 YWHAZP8-201ENST00000436935 731 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 RSU1P2-202ENST00000437884 485 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AC073614.1-201ENST00000438690 650 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.94□□□□□ -1.62
KRT40Q6A162 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
KRT40Q6A162 UBE2V1P7-201ENST00000446395 340 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT40Q6A162 MTCO1P48-201ENST00000448024 1096 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 MTND5P20-201ENST00000448677 143 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 OR6K1P-201ENST00000456766 971 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT40Q6A162 RN7SL810P-201ENST00000493031 276 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.94□□□□□ -1.62
KRT40Q6A162 ARL4AP2-201ENST00000507378 601 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.94□□□□□ -1.62
KRT40Q6A162 AC010342.1-201ENST00000514047 877 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT40Q6A162 Y_RNA.702-201ENST00000516843 96 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.94□□□□□ -1.62
KRT40Q6A162 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT40Q6A162 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT40Q6A162 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT40Q6A162 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRT40Q6A162 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.94□□□□□ -1.62
KRT40Q6A162 EIF5A2P1-201ENST00000564027 460 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.94□□□□□ -1.62
KRT40Q6A162 DUXAP4-201ENST00000603046 613 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AL031666.3-201ENST00000609320 1006 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 MIR3653-201ENST00000625572 110 ntBASIC4.94□□□□□ -1.62
KRT40Q6A162 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.94□□□□□ -1.62
KRT40Q6A162 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
KRT40Q6A162 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRT40Q6A162 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.94□□□□□ -1.62
KRT40Q6A162 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
KRT40Q6A162 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
KRT40Q6A162 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
KRT40Q6A162 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
KRT40Q6A162 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KRT40Q6A162 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KRT40Q6A162 RNU6-1090P-201ENST00000364065 94 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 RNU6-289P-201ENST00000364093 107 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 Y_RNA.296-201ENST00000364930 108 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 RNU6-444P-201ENST00000383988 108 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.93□□□□□ -1.62
KRT40Q6A162 PRRC2CP1-201ENST00000404428 159 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 GSTA9P-201ENST00000406231 611 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.93□□□□□ -1.62
KRT40Q6A162 RN7SKP266-201ENST00000410232 287 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AL161631.1-201ENST00000417933 486 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.93□□□□□ -1.62
KRT40Q6A162 RBMY1KP-201ENST00000423480 476 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 EIF1P3-201ENST00000423841 334 ntBASIC4.93□□□□□ -1.62
KRT40Q6A162 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.93□□□□□ -1.62
KRT40Q6A162 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.93□□□□□ -1.62
KRT40Q6A162 RPS4XP4-201ENST00000443195 763 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms