Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 SNORA26.8-201ENST00000391306 124 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 ATP5F1P4-201ENST00000397288 746 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 TMSB4XP8-201ENST00000402089 135 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 RN7SKP56-201ENST00000410513 331 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 PIGPP2-201ENST00000411569 458 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 TMSB4XP6-201ENST00000415187 135 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 TMSB4XP1-201ENST00000424567 135 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC244035.1-201ENST00000430042 390 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AL513175.1-201ENST00000431492 780 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 MTND2P19-201ENST00000449129 1012 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 NF1P3-201ENST00000457709 450 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 SETP11-201ENST00000473027 690 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 DSTNP2-201ENST00000504533 515 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 RNU6-202P-201ENST00000515998 96 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC107016.1-201ENST00000550463 337 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC007954.1-201ENST00000554198 494 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC020914.6-201ENST00000594327 272 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC008739.3-201ENST00000603262 127 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC064872.1-201ENST00000604823 1072 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC112220.3-201ENST00000605502 502 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 HMGB1P50-201ENST00000605814 607 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC103591.3-201ENST00000608684 209 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AL158063.1-201ENST00000615349 536 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 MIR6075-201ENST00000620782 95 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC008443.7-201ENST00000622195 246 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AL732618.1-201ENST00000623251 301 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AL356121.2-201ENST00000624715 780 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 MKKS-204ENST00000639674 192 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC107982.1-201ENST00000507171 1300 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AC011477.1-204ENST00000623416 1325 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 AL353743.4-201ENST00000422653 1547 ntBASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.41□□□□□ -1.7
TTC39AQ5SRH9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TTC39AQ5SRH9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TTC39AQ5SRH9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.4□□□□□ -1.7
TTC39AQ5SRH9 NCAPGP1-201ENST00000505112 1814 ntBASIC4.4□□□□□ -1.7
TTC39AQ5SRH9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.4□□□□□ -1.7
TTC39AQ5SRH9 RNU4-75P-201ENST00000364621 146 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AL590103.1-201ENST00000434488 307 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AL358232.1-201ENST00000448030 501 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 SNRPGP5-201ENST00000456003 220 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AL024509.2-201ENST00000493462 493 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC012170.1-201ENST00000495139 359 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 FTH1P24-201ENST00000503502 462 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC006499.5-201ENST00000505037 514 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 RN7SKP13-201ENST00000515933 244 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 OR5AK1P-201ENST00000524837 922 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 ROCK1P1-201ENST00000573767 549 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC053481.3-201ENST00000577881 843 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC008687.2-201ENST00000597865 520 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC119751.7-201ENST00000600494 245 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC006077.1-201ENST00000604746 343 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 U3.45-201ENST00000607547 219 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC245297.2-201ENST00000610119 565 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC013562.2-201ENST00000611632 603 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC092192.1-201ENST00000633154 1018 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 PCMTD1P7-201ENST00000634506 357 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 AC006504.1-201ENST00000562493 3666 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 MTND4P5-201ENST00000435821 1374 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 MTND4P34-201ENST00000572715 1371 ntBASIC4.4□□□□□ -1.71
TTC39AQ5SRH9 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TTC39AQ5SRH9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TTC39AQ5SRH9 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TTC39AQ5SRH9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
TTC39AQ5SRH9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.39□□□□□ -1.71
TTC39AQ5SRH9 Y_RNA.194-201ENST00000363985 102 ntBASIC4.39□□□□□ -1.71
TTC39AQ5SRH9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TTC39AQ5SRH9 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.39□□□□□ -1.71
TTC39AQ5SRH9 SUGT1P1-201ENST00000379514 476 ntBASIC4.39□□□□□ -1.71
TTC39AQ5SRH9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms