Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 YPEL5P1-201ENST00000419731 367 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 PAICSP7-201ENST00000419829 962 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 AC012498.1-201ENST00000424037 437 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 RPL7P46-201ENST00000425129 740 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 RPL17P35-201ENST00000432217 549 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 RPL7P55-201ENST00000450522 746 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 HMGB1P25-201ENST00000468402 607 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 RPS29P26-201ENST00000477483 171 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 RNU6-202P-201ENST00000515998 96 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 AC005951.1-201ENST00000576706 485 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 AC017100.2-201ENST00000584628 355 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 RN7SL622P-201ENST00000585292 275 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 MTND5P19-201ENST00000424872 1794 ntBASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTPN20Q4JDL3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 MIR16-2-201ENST00000362117 81 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 SNORA9.2-201ENST00000365361 133 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 RNU4-78P-201ENST00000410940 126 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 RNU6-272P-201ENST00000411028 104 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AC109780.2-201ENST00000413467 845 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 BX664727.1-201ENST00000416024 466 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 MRPL50P2-201ENST00000416821 482 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AC092170.1-201ENST00000440211 356 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AC093156.1-201ENST00000440382 670 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AL929288.2-201ENST00000446368 407 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 RNF138P1-201ENST00000502765 546 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 MTND4LP22-201ENST00000508209 276 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AC010374.2-201ENST00000512933 535 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 RNU6-416P-201ENST00000516265 103 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 IGJP1-201ENST00000522682 475 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 H3F3AP1-201ENST00000559984 334 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AC133794.1-201ENST00000602731 914 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AC113368.1-201ENST00000603736 382 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AL162274.2-201ENST00000614406 332 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AC022509.4-201ENST00000621404 572 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AL590240.3-201ENST00000621416 943 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 AC000403.1-201ENST00000613696 3585 ntBASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PTPN20Q4JDL3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 RNU1-35P-201ENST00000362782 153 ntBASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 SNORD65C-201ENST00000390962 71 ntBASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 RNU6-837P-201ENST00000391056 108 ntBASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 RNA5SP56-201ENST00000410277 118 ntBASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 OFD1P18Y-201ENST00000420889 959 ntBASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 RPL35AP12-201ENST00000425362 338 ntBASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 AL009174.1-201ENST00000426577 416 ntBASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 AC009969.1-201ENST00000438726 172 ntBASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 RABEPKP1-201ENST00000440529 1026 ntBASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 RPS26P56-201ENST00000444468 240 ntBASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 HMGN2P13-201ENST00000476476 274 ntBASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.05□□□□□ -1.92
PTPN20Q4JDL3 RNU1-61P-201ENST00000516107 151 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms