Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 OR6K1P-201ENST00000456766 971 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 AC146507.1-201ENST00000468335 354 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3□□□□□ -1.93
RFX7Q2KHR2 CKS1BP7-201ENST00000522230 235 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3□□□□□ -1.93
RFX7Q2KHR2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RFX7Q2KHR2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3□□□□□ -1.93
RFX7Q2KHR2 CKS1BP1-201ENST00000555221 240 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 MIR4524B-201ENST00000581569 115 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 AL160237.3-201ENST00000604114 1013 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 AL713998.2-201ENST00000604538 1198 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 AL627309.6-201ENST00000606857 840 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 U4.3-201ENST00000621047 82 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 AC025034.2-201ENST00000623264 286 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3□□□□□ -1.93
RFX7Q2KHR2 OFD1P6Y-202ENST00000451061 2724 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 AC092447.7-201ENST00000422212 1621 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 U8.2-201ENST00000363156 134 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
RFX7Q2KHR2 MIR153-1-201ENST00000384914 90 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3□□□□□ -1.93
RFX7Q2KHR2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3□□□□□ -1.93
RFX7Q2KHR2 MTCO2P17-201ENST00000424336 677 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3□□□□□ -1.93
RFX7Q2KHR2 NPM1P49-201ENST00000448027 714 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3□□□□□ -1.93
RFX7Q2KHR2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3□□□□□ -1.93
RFX7Q2KHR2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3□□□□□ -1.93
RFX7Q2KHR2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3□□□□□ -1.93
RFX7Q2KHR2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3□□□□□ -1.93
RFX7Q2KHR2 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3□□□□□ -1.93
RFX7Q2KHR2 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3□□□□□ -1.93
RFX7Q2KHR2 AC060766.3-201ENST00000591442 263 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 BDH2P1-201ENST00000602288 736 ntBASIC3□□□□□ -1.93
RFX7Q2KHR2 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3□□□□□ -1.93
RFX7Q2KHR2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RFX7Q2KHR2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RFX7Q2KHR2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RFX7Q2KHR2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RFX7Q2KHR2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.99□□□□□ -1.93
RFX7Q2KHR2 RNU6-1331P-201ENST00000363658 106 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 SNORA25.6-201ENST00000364121 118 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 DEFA7P-201ENST00000382676 285 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 MIR607-201ENST00000385241 96 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
RFX7Q2KHR2 AL359511.1-201ENST00000402970 211 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.99□□□□□ -1.93
RFX7Q2KHR2 SMC4P1-201ENST00000414479 527 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.99□□□□□ -1.93
RFX7Q2KHR2 RPL7P46-201ENST00000425129 740 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 HIGD1AP11-201ENST00000438361 280 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 RPS27P27-201ENST00000498779 255 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 OR5H5P-201ENST00000503164 928 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 AC234781.5-201ENST00000508429 271 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 OR5BN1P-201ENST00000532955 829 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.99□□□□□ -1.93
RFX7Q2KHR2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
RFX7Q2KHR2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RFX7Q2KHR2 AP003072.4-201ENST00000624580 310 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 AC079228.1-201ENST00000624774 1049 ntBASIC2.99□□□□□ -1.93
RFX7Q2KHR2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.98□□□□□ -1.93
RFX7Q2KHR2 MIR504-201ENST00000385065 83 ntBASIC2.98□□□□□ -1.93
RFX7Q2KHR2 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.98□□□□□ -1.93
RFX7Q2KHR2 UBE2D3P1-201ENST00000436669 444 ntBASIC2.98□□□□□ -1.93
RFX7Q2KHR2 VN1R17P-201ENST00000472048 1090 ntBASIC2.98□□□□□ -1.93
RFX7Q2KHR2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.98□□□□□ -1.93
RFX7Q2KHR2 RNU6-826P-201ENST00000516827 104 ntBASIC2.98□□□□□ -1.93
RFX7Q2KHR2 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.98□□□□□ -1.93
RFX7Q2KHR2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.98□□□□□ -1.93
RFX7Q2KHR2 SYF2P1-201ENST00000550658 413 ntBASIC2.98□□□□□ -1.93
RFX7Q2KHR2 MIR3670-2-201ENST00000582974 65 ntBASIC2.98□□□□□ -1.93
RFX7Q2KHR2 MIR3670-1-201ENST00000584160 65 ntBASIC2.98□□□□□ -1.93
RFX7Q2KHR2 MIR3670-3-201ENST00000584855 65 ntBASIC2.98□□□□□ -1.93
RFX7Q2KHR2 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.98□□□□□ -1.93
RFX7Q2KHR2 MIR3670-4-201ENST00000612260 65 ntBASIC2.98□□□□□ -1.93
RFX7Q2KHR2 AC004925.1-201ENST00000624256 2706 ntBASIC2.98□□□□□ -1.93
RFX7Q2KHR2 AC006020.1-201ENST00000420179 1854 ntBASIC2.98□□□□□ -1.93
RFX7Q2KHR2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RFX7Q2KHR2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX7Q2KHR2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RFX7Q2KHR2 MIR6073-201ENST00000352083 89 ntBASIC2.97□□□□□ -1.93
RFX7Q2KHR2 SNORA51.2-201ENST00000364595 132 ntBASIC2.97□□□□□ -1.93
RFX7Q2KHR2 RNU6-356P-201ENST00000384140 107 ntBASIC2.97□□□□□ -1.93
RFX7Q2KHR2 SNORA26.7-201ENST00000391288 122 ntBASIC2.97□□□□□ -1.93
RFX7Q2KHR2 AL034374.1-201ENST00000406329 351 ntBASIC2.97□□□□□ -1.93
RFX7Q2KHR2 AC003685.2-201ENST00000422795 395 ntBASIC2.97□□□□□ -1.93
RFX7Q2KHR2 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX7Q2KHR2 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX7Q2KHR2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.97□□□□□ -1.93
RFX7Q2KHR2 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX7Q2KHR2 AC104308.1-201ENST00000454621 333 ntBASIC2.97□□□□□ -1.93
RFX7Q2KHR2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.97□□□□□ -1.93
RFX7Q2KHR2 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX7Q2KHR2 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX7Q2KHR2 VN1R78P-201ENST00000597393 564 ntBASIC2.97□□□□□ -1.93
RFX7Q2KHR2 AC067747.1-201ENST00000608026 250 ntBASIC2.97□□□□□ -1.93
RFX7Q2KHR2 AC019131.2-201ENST00000609071 870 ntBASIC2.97□□□□□ -1.93
RFX7Q2KHR2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.97□□□□□ -1.93
RFX7Q2KHR2 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms