Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC004062.1-201ENST00000509926 645 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 RNU1-104P-201ENST00000517280 175 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AC090136.1-201ENST00000520009 240 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 MIR4444-1-201ENST00000581696 74 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 MIR4444-2-201ENST00000584390 74 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 U73023.1-201ENST00000603134 700 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AC007566.2-201ENST00000603642 413 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AC093536.2-201ENST00000565257 1406 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 MIR6073-201ENST00000352083 89 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 MIR26A1-201ENST00000362205 77 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 RNU6-851P-201ENST00000384565 107 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 CR769767.1-201ENST00000436337 346 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AL513321.1-201ENST00000441175 761 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AL590664.1-201ENST00000448065 339 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 RPL37P4-201ENST00000448908 268 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 OR51B8P-201ENST00000449892 769 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AL031183.1-201ENST00000457667 207 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AC104629.2-201ENST00000468627 598 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AC083906.5-201ENST00000503722 328 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 OR4R1P-201ENST00000529879 463 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 MIR3944-201ENST00000581277 108 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AC092474.3-201ENST00000603022 568 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AC124312.4-201ENST00000605533 310 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 MIR92B-201ENST00000607575 96 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AC104237.2-201ENST00000612456 443 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 CUL1P1-201ENST00000509510 2425 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 AC096644.4-201ENST00000563417 2912 ntBASIC2.13□□□□□ -2.07
HIST1H1AQ02539 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HIST1H1AQ02539 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HIST1H1AQ02539 AL512283.1-201ENST00000606756 1384 ntBASIC2.12□□□□□ -2.07
HIST1H1AQ02539 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HIST1H1AQ02539 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.12□□□□□ -2.07
HIST1H1AQ02539 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HIST1H1AQ02539 OR52E6-202ENST00000379946 954 ntBASIC2.12□□□□□ -2.07
HIST1H1AQ02539 SMC4P1-201ENST00000414479 527 ntBASIC2.12□□□□□ -2.07
HIST1H1AQ02539 AC080125.1-201ENST00000414888 684 ntBASIC2.12□□□□□ -2.07
HIST1H1AQ02539 AC092427.1-202ENST00000430569 476 ntBASIC2.12□□□□□ -2.07
HIST1H1AQ02539 RNA5SP310-201ENST00000459084 116 ntBASIC2.12□□□□□ -2.07
HIST1H1AQ02539 AC034236.1-201ENST00000469891 373 ntBASIC2.12□□□□□ -2.07
HIST1H1AQ02539 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.12□□□□□ -2.07
HIST1H1AQ02539 AC093014.1-201ENST00000548926 724 ntBASIC2.12□□□□□ -2.07
HIST1H1AQ02539 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.12□□□□□ -2.07
HIST1H1AQ02539 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.12□□□□□ -2.07
HIST1H1AQ02539 ZNF861P-201ENST00000588126 639 ntBASIC2.12□□□□□ -2.07
HIST1H1AQ02539 AC011890.2-201ENST00000613393 294 ntBASIC2.12□□□□□ -2.07
HIST1H1AQ02539 ATP5A1P2-202ENST00000616464 443 ntBASIC2.12□□□□□ -2.07
HIST1H1AQ02539 AL355493.4-201ENST00000618530 292 ntBASIC2.12□□□□□ -2.07
HIST1H1AQ02539 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HIST1H1AQ02539 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.12□□□□□ -2.07
HIST1H1AQ02539 Z82209.1-201ENST00000422141 2135 ntBASIC2.12□□□□□ -2.07
HIST1H1AQ02539 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HIST1H1AQ02539 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 RNA5SP252-201ENST00000391131 119 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 LINC01881-201ENST00000416103 412 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AC096632.1-201ENST00000427395 310 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AL513043.1-201ENST00000439124 535 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 MTCYBP34-201ENST00000439552 670 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 TPTE2P6-202ENST00000445572 1007 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AL671855.1-201ENST00000446875 1203 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AC114982.2-201ENST00000461396 358 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 SETP11-201ENST00000473027 690 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AC104689.1-201ENST00000473356 768 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 KC877373.1-201ENST00000479066 408 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 RAC1P5-201ENST00000512182 576 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms