Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
HSPG2P98160 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
HSPG2P98160 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.41□□□□□ -2.18
HSPG2P98160 AL592437.1-201ENST00000443781 492 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.41□□□□□ -2.18
HSPG2P98160 AC092185.1-201ENST00000491371 97 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HSPG2P98160 ELOCP31-201ENST00000540463 467 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.41□□□□□ -2.18
HSPG2P98160 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.41□□□□□ -2.18
HSPG2P98160 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
HSPG2P98160 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
HSPG2P98160 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
HSPG2P98160 MIR21-201ENST00000362134 72 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 AMD1P2-201ENST00000412936 992 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 RPS15AP12-201ENST00000419498 388 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.41□□□□□ -2.18
HSPG2P98160 TVP23BP2-201ENST00000455082 615 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC1.41□□□□□ -2.18
HSPG2P98160 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.41□□□□□ -2.18
HSPG2P98160 AP001542.2-201ENST00000593141 364 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 AL451074.6-201ENST00000608512 729 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.41□□□□□ -2.18
HSPG2P98160 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
HSPG2P98160 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.41□□□□□ -2.18
HSPG2P98160 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
HSPG2P98160 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.41□□□□□ -2.18
HSPG2P98160 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HSPG2P98160 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC1.41□□□□□ -2.18
HSPG2P98160 BTF3P4-201ENST00000418852 495 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 AC092427.1-202ENST00000430569 476 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.41□□□□□ -2.18
HSPG2P98160 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.41□□□□□ -2.18
HSPG2P98160 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.41□□□□□ -2.18
HSPG2P98160 RPL12P25-201ENST00000455592 494 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 AC068781.1-201ENST00000488231 618 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
HSPG2P98160 LTV1P1-201ENST00000510683 1237 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.41□□□□□ -2.18
HSPG2P98160 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.41□□□□□ -2.18
HSPG2P98160 AC091046.2-201ENST00000620775 665 ntBASIC1.41□□□□□ -2.18
HSPG2P98160 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
HSPG2P98160 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
HSPG2P98160 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HSPG2P98160 AC007342.7-201ENST00000624610 2337 ntBASIC1.4□□□□□ -2.18
HSPG2P98160 RNY1P10-201ENST00000363268 113 ntBASIC1.4□□□□□ -2.18
HSPG2P98160 AL451074.5-201ENST00000415894 435 ntBASIC1.4□□□□□ -2.18
HSPG2P98160 DNAJC19P4-201ENST00000440115 345 ntBASIC1.4□□□□□ -2.18
HSPG2P98160 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.4□□□□□ -2.18
HSPG2P98160 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.4□□□□□ -2.18
HSPG2P98160 RPL21P71-201ENST00000465598 459 ntBASIC1.4□□□□□ -2.18
HSPG2P98160 AC026412.2-201ENST00000512270 1075 ntBASIC1.4□□□□□ -2.18
HSPG2P98160 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
HSPG2P98160 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.4□□□□□ -2.18
HSPG2P98160 AC016542.2-201ENST00000624201 619 ntBASIC1.4□□□□□ -2.18
HSPG2P98160 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.4□□□□□ -2.18
HSPG2P98160 PWAR6-201ENST00000552334 4618 ntBASIC1.4□□□□□ -2.18
HSPG2P98160 ZNF355P-201ENST00000427301 3216 ntBASIC1.4□□□□□ -2.18
HSPG2P98160 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.4□□□□□ -2.18
HSPG2P98160 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HSPG2P98160 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 RN7SKP60-201ENST00000516985 239 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 RNA5SP490-201ENST00000517141 136 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.4□□□□□ -2.19
HSPG2P98160 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HSPG2P98160 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
HSPG2P98160 CR769767.1-201ENST00000436337 346 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 RN7SL283P-201ENST00000489055 303 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
HSPG2P98160 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HSPG2P98160 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
HSPG2P98160 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HSPG2P98160 SNORA68.2-201ENST00000391263 128 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 FGF7P8-201ENST00000402994 292 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 AL512430.2-201ENST00000406786 339 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 AL034379.1-201ENST00000423216 253 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 AC105402.2-201ENST00000438503 358 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.4□□□□□ -2.19
HSPG2P98160 AC007395.1-201ENST00000451333 677 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 AC007182.2-201ENST00000489251 402 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 CCNHP1-201ENST00000513311 678 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 AP004372.1-201ENST00000604842 844 ntBASIC1.4□□□□□ -2.19
HSPG2P98160 AC090229.1-201ENST00000590983 1609 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
HSPG2P98160 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HSPG2P98160 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
HSPG2P98160 HMGB1P10-201ENST00000395823 563 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 RNU2-17P-201ENST00000410290 190 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 FABP5P13-201ENST00000452144 328 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 RNA5SP200-201ENST00000516360 103 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 PDCD5P1-201ENST00000543528 309 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.39□□□□□ -2.19
HSPG2P98160 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.39□□□□□ -2.19
HSPG2P98160 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
HSPG2P98160 AC091953.2-201ENST00000623979 160 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HSPG2P98160 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC1.39□□□□□ -2.19
HSPG2P98160 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
HSPG2P98160 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms