Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.5□□□□□ -1.85
CCNA1P78396 RPS27P23-201ENST00000487608 251 ntBASIC3.5□□□□□ -1.85
CCNA1P78396 OR5H5P-201ENST00000503164 928 ntBASIC3.5□□□□□ -1.85
CCNA1P78396 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.5□□□□□ -1.85
CCNA1P78396 RNU6-711P-201ENST00000517255 106 ntBASIC3.5□□□□□ -1.85
CCNA1P78396 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.5□□□□□ -1.85
CCNA1P78396 AC107016.2-201ENST00000547968 190 ntBASIC3.5□□□□□ -1.85
CCNA1P78396 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.5□□□□□ -1.85
CCNA1P78396 MTATP6P25-201ENST00000574491 261 ntBASIC3.5□□□□□ -1.85
CCNA1P78396 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.5□□□□□ -1.85
CCNA1P78396 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.5□□□□□ -1.85
CCNA1P78396 RMST_8.1-201ENST00000610287 165 ntBASIC3.5□□□□□ -1.85
CCNA1P78396 AL110115.1-201ENST00000614396 364 ntBASIC3.5□□□□□ -1.85
CCNA1P78396 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.5□□□□□ -1.85
CCNA1P78396 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CCNA1P78396 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNA1P78396 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNA1P78396 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNA1P78396 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNA1P78396 SAR1AP2-201ENST00000392696 594 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNA1P78396 AC109780.2-201ENST00000413467 845 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.49□□□□□ -1.85
CCNA1P78396 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCNA1P78396 RPL21P40-201ENST00000428586 483 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 TRIM60P13-201ENST00000432350 1283 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 AC000041.1-201ENST00000439655 175 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 TXNP1-201ENST00000441872 371 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.49□□□□□ -1.85
CCNA1P78396 RSL24D1P2-201ENST00000445584 366 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.49□□□□□ -1.85
CCNA1P78396 AC010301.1-201ENST00000473936 355 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 AC025181.1-201ENST00000477507 416 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 AC114967.1-201ENST00000504890 259 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 FABP5P12-201ENST00000515543 389 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.49□□□□□ -1.85
CCNA1P78396 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.49□□□□□ -1.85
CCNA1P78396 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.49□□□□□ -1.85
CCNA1P78396 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.49□□□□□ -1.85
CCNA1P78396 AC095057.3-201ENST00000567102 1157 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.49□□□□□ -1.85
CCNA1P78396 MIR4425-201ENST00000580572 84 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 AC016542.1-201ENST00000608259 493 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 AL451074.6-201ENST00000608512 729 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CCNA1P78396 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.49□□□□□ -1.85
CCNA1P78396 AC007496.3-201ENST00000624987 3443 ntBASIC3.49□□□□□ -1.85
CCNA1P78396 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CCNA1P78396 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNA1P78396 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCNA1P78396 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNA1P78396 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CCNA1P78396 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCNA1P78396 ZNF542P-204ENST00000482727 1305 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CCNA1P78396 MIR30E-201ENST00000362104 92 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 RNA5SP258-201ENST00000362750 119 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CCNA1P78396 RNU6-301P-201ENST00000384277 107 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 AC110754.1-201ENST00000399740 601 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 RPL21P32-201ENST00000419877 477 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.48□□□□□ -1.85
CCNA1P78396 TRIAP1P1-201ENST00000427062 225 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.48□□□□□ -1.85
CCNA1P78396 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.48□□□□□ -1.85
CCNA1P78396 RPL7P59-201ENST00000447700 943 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 RPL36AP33-201ENST00000450395 310 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.48□□□□□ -1.85
CCNA1P78396 AC104308.1-201ENST00000454621 333 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 RPL31P50-201ENST00000471002 296 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 RPS29P26-201ENST00000477483 171 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 RN7SL429P-201ENST00000479090 223 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 RN7SL489P-201ENST00000486185 223 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 RN7SL327P-201ENST00000488659 223 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 AC111000.2-201ENST00000507775 550 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCNA1P78396 ARL2BPP6-201ENST00000512757 439 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 SCGB1D5P-201ENST00000515134 247 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.48□□□□□ -1.85
CCNA1P78396 AC103783.1-201ENST00000520506 373 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 AC093331.1-201ENST00000521474 169 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 AC074051.3-201ENST00000570238 358 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.48□□□□□ -1.85
CCNA1P78396 AL365503.1-201ENST00000605247 905 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 RN7SL853P-201ENST00000617250 223 ntBASIC3.48□□□□□ -1.85
CCNA1P78396 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.48□□□□□ -1.85
CCNA1P78396 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCNA1P78396 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCNA1P78396 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCNA1P78396 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.47□□□□□ -1.85
CCNA1P78396 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.47□□□□□ -1.85
CCNA1P78396 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCNA1P78396 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCNA1P78396 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCNA1P78396 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.47□□□□□ -1.85
CCNA1P78396 RN7SKP285-201ENST00000410137 318 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 RNU6-55P-201ENST00000411092 107 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 RNU6-954P-201ENST00000411355 107 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCNA1P78396 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms